TCONS_00017282-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017282-protein
Unique NameTCONS_00017282-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length345

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017282-protein ID=TCONS_00017282-protein|Name=TCONS_00017282-protein|organism=Clytia hemisphaerica|type=polypeptide|length=345bp
MTTTETTQKPTAASSQNPKDAIERVVIHPLVLLSVVDHFNRMSKVGNQRR
VAGILLGSIRNKVLDVANSFAIPFDEDDRDPSVWYLDHDYLDNMAAMFKK
VNAKERVIGWYHTGPKLHPNDIRINELVRRFNPNSVLVIIDAKPKELGLP
TEAYIAIEEVHDDGTPTSKTFEHIPSEIGAEEAEEVGVEHLLRDIRNVTV
GTLSQRITNQVSSLKGLHAHLQDIHTYLEQVISGKLPVNHTIMYHLQDIF
NLLPNLNVEEFIKSITVMTNDQMVVIYLASVVRTVIALHNLINNKLQNKD
LEREKEEGKKDKDATKADKDEKKDKKDSSKDDKSTTDKKESTTKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009671XLOC_009671Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017282TCONS_00017282Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000555JAMM/MPN+_dom
IPR024969Rpn11/EIF3F_C
IPR033858MPN_RPN7_8
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005838proteasome regulatory particle
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005838 proteasome regulatory particle
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 291..318
NoneNo IPR availableGENE3D3.40.140.10coord: 22..162
e-value: 1.7E-14
score: 53.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..345
IPR000555JAB1/MPN/MOV34 metalloenzyme domainSMARTSM00232pad1_6coord: 24..159
e-value: 9.9E-36
score: 134.7
IPR000555JAB1/MPN/MOV34 metalloenzyme domainPFAMPF01398JABcoord: 21..134
e-value: 1.2E-30
score: 105.8
IPR024969Rpn11/EIF3F, C-terminalPFAMPF13012MitMem_regcoord: 182..293
e-value: 7.7E-36
score: 122.8
IPR03385826S Proteasome non-ATPase regulatory subunit 7/8CDDcd08062MPN_RPN7_8coord: 23..303
e-value: 4.58841E-177
score: 494.409

Blast
[Close]
BLAST of TCONS_00017282-protein vs. Swiss-Prot (Human)
Match: PSMD7 (26S proteasome non-ATPase regulatory subunit 7 OS=Homo sapiens GN=PSMD7 PE=1 SV=2)

HSP 1 Score: 436.032 bits (1120), Expect = 2.631e-154
Identity = 208/283 (73.50%), Postives = 257/283 (90.81%), Query Frame = 0 
Query:   18 PKDAIERVVIHPLVLLSVVDHFNRMSKVGNQRRVAGILLGSIRNKVLDVANSFAIPFDEDDRDPSVWYLDHDYLDNMAAMFKKVNAKERVIGWYHTGPKLHPNDIRINELVRRFNPNSVLVIIDAKPKELGLPTEAYIAIEEVHDDGTPTSKTFEHIPSEIGAEEAEEVGVEHLLRDIRNVTVGTLSQRITNQVSSLKGLHAHLQDIHTYLEQVISGKLPVNHTIMYHLQDIFNLLPNLNVEEFIKSITVMTNDQMVVIYLASVVRTVIALHNLINNKLQNKD 300
            P+ A+++VV+HPLVLLSVVDHFNR+ KVGNQ+RV G+LLGS + KVLDV+NSFA+PFDEDD+D SVW+LDHDYL+NM  MFKKVNA+ER++GWYHTGPKLH NDI INEL++R+ PNSVLVIID KPK+LGLPTEAYI++EEVHDDGTPTSKTFEH+ SEIGAEEAEEVGVEHLLRDI++ TVGTLSQRITNQV  LKGL++ L DI +YLE+V +GKLP+NH I+Y LQD+FNLLP+++++EF+K+  + TNDQMVV+YLAS++R+V+ALHNLINNK+ N+D
Sbjct:    2 PELAVQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRD 284
The following BLAST results are available for this feature:
BLAST of TCONS_00017282-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PSMD72.631e-15473.5026S proteasome non-ATPase regulatory subunit 7 OS=... [more]
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