TCONS_00017211-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017211-protein
Unique NameTCONS_00017211-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length301

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017211-protein ID=TCONS_00017211-protein|Name=TCONS_00017211-protein|organism=Clytia hemisphaerica|type=polypeptide|length=301bp
METMNYIDGSSEMAFGGQEPYPYTNFLNNCQYQETDDMNNSYQCAYGSNY
QSDFSDSSELNCDEFDDVDCGGIISGAKNSNSAKLDRVKRIVDNSGRKRR
IYSTIHNDPKQSTRRFRANDRERRRMNSLNGALQALKGCVPSYHGKKRLT
KLQILKFACHYISDLSDILCTEEDSNPQTNYPEINNNISNTTELKSQTNF
NTADAFSNIMAATGDQQRNMMDQEQQIQSMPIDHNSVNGLSMLQRLEYLT
FHSYMAAMTDGNENLNLPGVSDTSSNPDFFPINGVDQPNLISPNNNHIYN
Y
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009631XLOC_009631Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017211TCONS_00017211Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 119..171
e-value: 2.2E-13
score: 60.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 115..165
e-value: 5.3E-15
score: 55.0
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3D4.10.280.10coord: 101..168
e-value: 5.1E-14
score: 51.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 113..165
score: 14.418
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 114..169
e-value: 1.48843E-14
score: 65.6983
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 111..175

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017211-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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