TCONS_00017111-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017111-protein
Unique NameTCONS_00017111-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length390

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017111-protein ID=TCONS_00017111-protein|Name=TCONS_00017111-protein|organism=Clytia hemisphaerica|type=polypeptide|length=390bp
MVTNLKRWNCFTISLLLPYFATVNQEVYAVSLEEIENSWHKTTTKIIQTT
TATIKLKIQRYKAFPNQMTRAGGYKNEKNRYTMRTCAEKCTSEATCASFS
YELPGTNCRRFSGVYANSQSSAIYTGGNVQFFEKLNPCNKIRNLCEHGSE
CVPDILSKSYSCINCFSPYTGKHCNESGPVHNPNISEDILYGRNASCRDL
KKNFQNYMAGMYWIHPWRDTRKIKVNCNFDGTMFITSIIKDDPSPIRELF
AEDLEDGLNIYDGNFRAHPSFASKLEKLIRFDFLKFKCQKTGVGFEVKIK
SFKLHECYNVMFYFLGEATIADSSKYCLRGNYKYTSALYNEWPTKGVPAD
LRLFKDILIKDDSTKMTFTNDSMQCFGDEGTWDFFNLNIV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009568XLOC_009568Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017111TCONS_00017111Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003609Pan_app
IPR000742EGF-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.50.4.10coord: 56..133
e-value: 9.6E-6
score: 25.1
NoneNo IPR availableGENE3D2.10.25.10coord: 134..180
e-value: 3.3E-5
score: 23.2
NoneNo IPR availableSUPERFAMILY57414Hairpin loop containing domain-likecoord: 78..134
IPR003609PAN/Apple domainPFAMPF00024PAN_1coord: 62..134
e-value: 1.0E-4
score: 22.1
IPR003609PAN/Apple domainPROSITEPS50948PANcoord: 56..138
score: 7.226
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 134..175
score: 11.0

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017111-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top