TCONS_00016941-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016941-protein
Unique NameTCONS_00016941-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length602

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016941-protein ID=TCONS_00016941-protein|Name=TCONS_00016941-protein|organism=Clytia hemisphaerica|type=polypeptide|length=602bp
MVNDKSISFPMSDTDNEDDESLMASGRSSSLNSLSQPLLSSDESERNKKP
RRHVLSDRLFAERNKKLAKFCVMLTVTLERTAYYGLLGNLAYFTNVYLDY
TADESVNVTLGFSGLTWISCFIGGILGDSLLGRFNTIITGLIIYIVGYAN
MSYIAHIMNHEIDDDDFDRGRQKLFVGWFLGSLFLISLGEGCFKSNMSPF
GADQIDSNSDNSELRSFFNYFYWAINIGSLMGFSLIVWIQIHFGFCTGYV
VPLSLLGLGALIFIVPRQRNYHILLPKKNVIMIIKILWNALTGKRPHSAY
EEYNPMDGRLDRAKIKYGGKFLDSDVDDVKVLVSLFPTLLFLIIYCSCYY
QVNGLFLVQGMHMRIPTMENEEIPAAWLQLVNNITVLFLVPVIDQFVYPK
LDSLFERAPHLFRMSIGMIIASLAMVSAGLVEYHRKNTAGSHTNEVNDEH
IRILARNFSIFYQIPQYVLLGISEIFVLITGLEFAYCRAPRSMQSFVTSL
FFVVNGIGALLTSAIIVLGNKLGFNFIGKDSSKLSRDDPVPHLTGNLDHF
FYFMACLNFLNWILFVIYSLRKSRKKQRRDLERTVAAFIQGSYEDSLRAS
PT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009491XLOC_009491Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016941TCONS_00016941Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000109POT_fam
IPR018456PTR2_symporter_CS
IPR020846MFS_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0006857oligopeptide transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006857 oligopeptide transport
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 40..282
e-value: 6.4E-18
score: 64.2
NoneNo IPR availableGENE3D1.20.1250.20coord: 326..586
e-value: 2.3E-14
score: 52.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
IPR000109Proton-dependent oligopeptide transporter familyPFAMPF00854PTR2coord: 134..519
e-value: 1.6E-75
score: 254.3
IPR018456PTR2 family proton/oligopeptide symporter, conserved sitePROSITEPS01023PTR2_2coord: 218..230
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 84..516
e-value: 1.00422E-7
score: 51.9309
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 319..580
coord: 54..273

Blast
[Close]
BLAST of TCONS_00016941-protein vs. Swiss-Prot (Human)
Match: S15A4 (Solute carrier family 15 member 4 OS=Homo sapiens GN=SLC15A4 PE=1 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 1.281e-66
Identity = 168/544 (30.88%), Postives = 273/544 (50.18%), Query Frame = 0 
Query:   72 VMLTVTLERTAYYGLLGNLAYFTN-VYLDYTADESVNVTLGFSGLTWISCFIGGILGDSLLGRFNTIITGLIIYIVGY------------ANMSYIAHIMNHEIDDDDFDRGRQKLFVGWFLGSLFLISLGEGCFKSNMSPFGADQIDSNSDNSELRSFFNYFYWAINIGSLMGFSLIVWIQIHFGFCTGYVVPLSLLGLGALIFIVPRQRNYHILLPKKNVIM-IIKIL-WNALTGKRPHSAYE--------EYNPMDGRLDRAKIKYGGKFLDSDVDDVKVLVSLFPTLLFLIIYCSCYYQVNGLFLVQGMHMRIPTMEN-----EEIPAAWLQLVNNITVLFLVPVIDQFVYPKLDSLFERAPHLFRMSIGMIIASLAMVSAGLVEYHRKNTAGSHTNEVNDEHIRILARNFSIFYQIPQYVLLGISEIFVLITGLEFAYCRAPRSMQSFVTSLFFVVNGIGALLTSAIIVLGNKLGFNFIGKDSSKLSRDDPVPHLTGN-LDHFFYFMACLNFLNWILFVIYSLRKSRKKQRRDLERTVA 586
            V+LT  LER A+YG+  NL  F N     +   ++    L F GLT++    GG L D+ LGR   I+  L +Y++G             A +   A ++N      D      +         L L+ LG    K+N++PFGADQ+      +  R FFN+FYW+IN+G+++    I +IQ +  F TGY +P   +GL  ++F+   Q  +    P  +    + KIL ++  + KR              + +      D  K+ +GG F +  V+DVK LV + P  L LI Y + Y+Q+   +++Q +H+RIP + N       +PAAWL + + + +L L+P+ D+ V P L         L R+++GM     +  +AG++E  R N     T      ++   A + S+++Q+PQY+L+GISEIF  I GLEFAY  AP+SMQS +  LFF  +G+G+ + S ++ L   +    IG  SS     +    + G  L+++F+ +A +     +LF+I S+   +    RD +R+ A
Sbjct:   40 VLLTELLERAAFYGITSNLVLFLNGAPFCWEGAQASEALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLAFPLLAAPATRAALCGSARLLNCTAPGPD---AAARCCSPATFAGLVLVGLGVATVKANITPFGADQVKDRGPEAT-RRFFNWFYWSINLGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLC-GQSVFITKPPDGSAFTDMFKILTYSCCSQKRSGERQSNGEGIGVFQQSSKQSLFDSCKMSHGGPFTEEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEISNITTTPHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGLLPSSLKRIAVGMFFVMCSAFAAGILESKRLNLVKEKTINQTIGNVVYHAADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLAL---VSIKAIGWMSSHTDFGN----INGCYLNYYFFLLAAIQGATLLLFLIISV---KYDHHRDHQRSRA 568
The following BLAST results are available for this feature:
BLAST of TCONS_00016941-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S15A41.281e-6630.88Solute carrier family 15 member 4 OS=Homo sapiens ... [more]
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