TCONS_00016733-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016733-protein
Unique NameTCONS_00016733-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length648

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016733-protein ID=TCONS_00016733-protein|Name=TCONS_00016733-protein|organism=Clytia hemisphaerica|type=polypeptide|length=648bp
MRWEAMGMMMPPPFPFFHPGMPLPPGMQMPPNMPAGGMPPFMPNGDMSTM
PWFNDQVLACGGMISSDSKLPADFHDETKDIFGKPVNKTQSLAPKQHTPI
SKPIMKPDLFQPHYMKSKANGNGPPSRINGNSTAASSNTAPSSTQLNGAQ
SKEKDKKPINKNNPWNVDPFMPNFSKPSISLITQKEEASKHAPPNARNNS
TPPQRISPQTIPRNSAANTYQKQQTQQQQQAWKKNNQEVSLRPASSLTKK
DDGKSKADELSGKQFTNLTINDKTNKPKKTGLSKSDVDKKIVEVNESHKK
DEDTTKACNDLQSLATNLKYSKMVAKQLLIFTSSQNEEEWARLVQLITQC
VEKSIFSEDTLVNAYNLLLDDIKVIESGNGKNFMALIASTTVEKDWIKLS
TVMESFEDGAHYPAPMNCLSNLHKSKGKDWLMSMLKKQKIDCKKIFPKDE
WSDNAIMQVAQNMEMTFLFPQLCLKEELLKMMKEGANEDELIQWIKDNEN
ELNKKQLVHLVVTCSVTIATQITFENGGDLQQKPDKETQELEKEILGRLN
GFLRQMIGPEMCDQLEAVYALQVFCHDKDFPKEMLLRMFLCFYNMEIIDE
DVFLKWKEDINDSYPGKGKSLFQVNNWLQWLETADEEEEEEENADDAE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009356XLOC_009356Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016733TCONS_00016733Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003307W2_domain
IPR003891Initiation_fac_eIF4g_MI
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003307W2 domainSMARTSM00515542_3coord: 550..637
e-value: 6.6E-18
score: 75.5
IPR003307W2 domainPFAMPF02020W2coord: 563..641
e-value: 1.4E-19
score: 69.9
IPR003307W2 domainPROSITEPS51363W2coord: 464..641
score: 20.6
NoneNo IPR availableGENE3D1.25.40.180coord: 478..642
e-value: 7.6E-31
score: 107.0
NoneNo IPR availableGENE3D1.25.40.180coord: 278..477
e-value: 8.8E-23
score: 80.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..260
NoneNo IPR availableCDDcd11559W2_eIF4G1_likecoord: 469..612
e-value: 2.44352E-28
score: 109.682
IPR003891Initiation factor eIF-4 gamma, MA3PROSITEPS51366MIcoord: 286..407
score: 8.913
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 281..468
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 484..635

Blast
[Close]
BLAST of TCONS_00016733-protein vs. Swiss-Prot (Human)
Match: IF4G2 (Eukaryotic translation initiation factor 4 gamma 2 OS=Homo sapiens GN=EIF4G2 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 8.469e-46
Identity = 111/371 (29.92%), Postives = 209/371 (56.33%), Query Frame = 0 
Query:  276 KPKKTGL----SKSDVDKKIVEVNESHKKDEDTTKACNDLQSLATNLKYSKMVAKQLLIFTSSQNEEEWARLVQLITQCVEKSIFSEDTLVNAYNLLLD-------DIKVIESGNGKNFMALIASTTVEKDWIKLSTVMESFEDGAHYPAPMNCLSNLHKSKGKDWLMSMLKKQKIDCKKIFPKDEWSDNAIMQVAQNMEMTFLFPQLCLKEELLKMMKEGANEDELIQWIKDNEN-ELN-KKQLVHLVVTCSV-TIATQITF-ENGGDLQQKPDKETQELEKEILGRLNGFLRQMIGPEMCDQLEAVYALQVFCHDKDFPKEMLLRMFLCFYNMEIIDEDVFLKWKEDINDSYPGKGKSLFQVNNWLQWL 631
            KP KT      SK ++ K    V   +    +  +A N ++ +     +   +  +++I +  +++E+  +   LI+   ++ I + D  + A+  +LD       DI ++     K+++A  A+  +  + + +S + +  E G H+P  + CL  L K + ++WL  + ++ K++ +K+ P+ + + + ++++ +   ++FLFP L L++ELLK +K   +   + +WIKDN + +L+  K  V++++T  +  I++++    +  D    P KE  E EK++L      +++ +   +  Q+ A+YALQV C++ +FPK MLLR F+ FY+MEII+E+ FL WKEDI   +PGKGK+LFQVN WL WL
Sbjct:  529 KPAKTSKKPPPSKEELLKLTETVVTEYLNSGNANEAVNGVREMRAPKHFLPEMLSKVIILSLDRSDEDKEKASSLISLLKQEGIATSDNFMQAFLNVLDQCPKLEVDIPLV-----KSYLAQFAARAIISELVSISELAQPLESGTHFPLFLLCLQQLAKLQDREWLTELFQQSKVNMQKMLPEIDQNKDRMLEILEGKGLSFLFPLLKLEKELLKQIKLDPSPQTIYKWIKDNISPKLHVDKGFVNILMTSFLQYISSEVNPPSDETDSSSAPSKEQLEQEKQLLLSFKPVMQKFLHDHVDLQVSALYALQVHCYNSNFPKGMLLRFFVHFYDMEIIEEEAFLAWKEDITQEFPGKGKALFQVNQWLTWL 894
The following BLAST results are available for this feature:
BLAST of TCONS_00016733-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IF4G28.469e-4629.92Eukaryotic translation initiation factor 4 gamma 2... [more]
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