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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00016624-protein ID=TCONS_00016624-protein|Name=TCONS_00016624-protein|organism=Clytia hemisphaerica|type=polypeptide|length=507bp
GSSATRPGKVLKGGKGAYCCIPECKSSFYNSDMTKTEIGFFKIPTNPKRN
QEWKRIIYRYRRKGGKDKFKITSTTVICEFHFKAEDIKVTLGTHKKVLRK
GAIPRVFSFKKPKKVTSRKSPKKRLSKIFDDPACNTIQKEPENRNVNDIN
VNDINNEVNEINELKQRIEELEQENLSLKLEVEELKKNFYNYDNLSKDKK
FFKSETGLTVENFTELLSLLDVKENCENIKFYDSKLKGADDITLPPGNKK
PGPKVKLSAEDQLLLVLSWLKGGFNLKHCSWLFNLSVPSTSRYIITWINL
MYFTLGSIPIWPSKLQIKETMPISFKELYPKTRCIVDCTELFCQRPSSLA
TQSNMYSQYKSHVTYKGLIGIAPSGSITFVSQLYEGSISDKEIVDRSGLL
NKSFWEEGDSLMADRGFTIKELLDPLKVELNIPAFLEGRTQFTTEEVKES
QTIASVRIHVERAIQRVKKFRQIRNEIPLALHGSINQIWTVACLLCNFMS
PLIQKDY Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 151..188 |
| None | No IPR available | GENE3D | 1.10.287.540 | | coord: 145..238
e-value: 3.6E-5
score: 23.1 |
| None | No IPR available | CDD | cd14686 | bZIP | coord: 159..187
e-value: 0.00306068
score: 34.8285 |
| None | No IPR available | SUPERFAMILY | 57716 | Glucocorticoid receptor-like (DNA-binding domain) | coord: 18..109 |
| IPR006612 | Zinc finger, C2CH-type | SMART | SM00692 | dm3 | coord: 40..112
e-value: 1.1E-4
score: 31.6 |
| IPR006612 | Zinc finger, C2CH-type | SMART | SM00980 | THAP_2 | coord: 17..113
e-value: 7.1E-9
score: 45.5 |
| IPR006612 | Zinc finger, C2CH-type | PFAM | PF05485 | THAP | coord: 19..107
e-value: 1.4E-11
score: 45.1 |
| IPR006612 | Zinc finger, C2CH-type | PROSITE | PS50950 | ZF_THAP | coord: 15..107
score: 16.382 |
| IPR027806 | Harbinger transposase-derived nuclease domain | PFAM | PF13359 | DDE_Tnp_4 | coord: 336..497
e-value: 2.2E-44
score: 150.8 |
| IPR027805 | Transposase, Helix-turn-helix domain | PFAM | PF13613 | HTH_Tnp_4 | coord: 256..305
e-value: 1.8E-8
score: 33.8 |
Blast
The following BLAST results are available for this feature:
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