TCONS_00016491-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016491-protein
Unique NameTCONS_00016491-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length212

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016491-protein ID=TCONS_00016491-protein|Name=TCONS_00016491-protein|organism=Clytia hemisphaerica|type=polypeptide|length=212bp
MGIQLRNDSRDKINSIRQNCRTIVPDDAANLMIETIDFGDATKEMAAVAI
YARILHLNGEYSCQLVFARSKILSSSTQPRAELEAAVLNTHTSEVVKRAL
KSKHNGSIKLTDSTIVLHWISNDEISLKPFVRNRIIEIIRHTTHEDWQHI
DTNNMLADIAARKGATIDDISSKSTWINGHSWLRGDKSTFPTKTLYVNNH
LHQPTNSNQMDD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009212XLOC_009212Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016491TCONS_00016491Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008042Retrotrans_Pao
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008042Retrotransposon, PaoPFAMPF05380Peptidase_A17coord: 22..113
e-value: 2.0E-11
score: 44.1
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 37..164
e-value: 1.4E-4
score: 21.3

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016491-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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