TCONS_00016408-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00016408-protein
Unique Name	TCONS_00016408-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	487

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00016408-protein ID=TCONS_00016408-protein|Name=TCONS_00016408-protein|organism=Clytia hemisphaerica|type=polypeptide|length=487bp
KIPRKRAHSIFKMADSEEGESAFYRSKSRRKRTHSYGSMTTSCDENDDDP
SEQKVGDITITFFYKPRTLTALALCIIAMLYFAFVRDAEHNQHDNFWHGC
LGALALFLVICLLICPNGPFIRPHPAIWRLVFGISVVYAMFLAFLLFQSY
KDFLTILQYFDPNLKGAEPDTEVYSDDCSWSVFVSRLDIFCVAHFLGFTV
KAIMLRNAHLLWLMSITWEFTEIAFSHLLENFKECWWDSLILDILLCNGL
GIHFGLFICKKLEMRTYYWESIKDLHGASKKFRRAVMQFTPVSWTSVQWF
NPKDVKSRFLALCLLVLMWQVAELNTFFLKHIFAIPTHHWLNVARIVLIS
LITMPTTRQYYLYSTDTRCKRLGTQAWVFVCITCLEAILCIRHARELFSQ
TQYTWVAAWVAVESFACFILVYVLIIWRGKRKLTDGKVPSRVPSHLRFKE
VDGQENTDTDSEDYAEDKRSSYSRKSLRTRRRTKKEW

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_009165	XLOC_009165	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00016408	TCONS_00016408	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004277	PSS

Vocabulary: **Biological Process**
Term	Definition
GO:0006659	phosphatidylserine biosynthetic process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006659	phosphatidylserine biosynthetic process

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004277	Phosphatidyl serine synthase	PFAM	PF03034	PSS	coord: 123..393 e-value: 1.6E-99 score: 333.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 449..487
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..51

Blast

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BLAST of TCONS_00016408-protein vs. Swiss-Prot (Human)
Match: PTSS1 (Phosphatidylserine synthase 1 OS=Homo sapiens GN=PTDSS1 PE=1 SV=1)

HSP 1 Score: 391.349 bits (1004), Expect = 2.323e-132
Identity = 206/444 (46.40%), Postives = 289/444 (65.09%), Query Frame = 0

Query:   51 SEQKVGDITITFFYKPRTLTALALCIIAMLYFAFVRDAEHNQHDNFWHGCLGALALFLVICLLICPNGPFIRPHPAIWRLVFGISVVYAMFLAFLLFQSYKDFLTILQYFDPNLKGA--EPDTEVYSDDC---SWSVFVSRLDIFCVAHFLGFTVKAIMLRNAHLLWLMSITWEFTEIAFSHLLENFKECWWDSLILDILLCNGLGIHFGLFICKKLEMRTYYWESIKDLHGASKKFRRAVMQFTPVSWTSVQWFNPKDVKSRFLALCLLVLMWQVAELNTFFLKHIFAIPTHHWLNVARIVLISLITMPTTRQYYLYSTDTRCKRLGTQAWVFVCITCLEAILCIRHARELFSQTQYTWVAAWVAVESFACFILVYVLIIWR---GKRKLT-----DGKVPSRVPSHLRFKEVDGQENTD----TDSEDYAEDKRSSYSRKSL 477
            +EQ+V DITI FFY+P T+T L+  I++++YFAF RD +    DN W G L  +  FL+I +L  PNGPF RPHPA+WR+VFG+SV+Y +FL FLLF +++   +++ + DPNL+ A  E D   Y+ +C   +W   +S  DIF   HF G+ +KA+++R+  L W +SITWE TE+ F HLL NF ECWWD +ILDILLCNG GI  G+ +C+ LEMRTY+W S KD+H  + K +RAV+QFTP SWT V+WF+PK    R   + L +++WQ+ ELNTFFLKHIF     H L+  RI+ I  IT PT RQYY Y TDT+CKR+GTQ WVF  I  LEAI+CI+  ++LFS+TQ  +V  W+   +F  F+ +Y +I +    G R+ T     DG     +  H R K   G E++      ++E ++  +R+ +S+  +
Sbjct:   25 NEQQVEDITIDFFYRPHTITLLSFTIVSLMYFAFTRD-DSVPEDNIWRGILSVIFFFLIISVLAFPNGPFTRPHPALWRMVFGLSVLYFLFLVFLLFLNFEQVKSLMYWLDPNLRYATREADVMEYAVNCHVITWERIISHFDIFAFGHFWGWAMKALLIRSYGLCWTISITWELTELFFMHLLPNFAECWWDQVILDILLCNGGGIWLGMVVCRFLEMRTYHWASFKDIHTTTGKIKRAVLQFTPASWTYVRWFDPKSSFQRVAGVYLFMIIWQLTELNTFFLKHIFVFQASHPLSWGRILFIGGITAPTVRQYYAYLTDTQCKRVGTQCWVFGVIGFLEAIVCIKFGQDLFSKTQILYVVLWLLCVAFTTFLCLYGMIWYAEHYGHREKTYSECEDGTYSPEISWHHR-KGTKGSEDSPPKHAGNNESHSSRRRNRHSKSKV 466

The following BLAST results are available for this feature:

BLAST of TCONS_00016408-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00016408-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PTSS1	2.323e-132	46.40	Phosphatidylserine synthase 1 OS=Homo sapiens GN=P...	[more]

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TCONS_00016408-protein (polypeptide) - C. hemisphaerica