TCONS_00016325-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016325-protein
Unique NameTCONS_00016325-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length189

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016325-protein ID=TCONS_00016325-protein|Name=TCONS_00016325-protein|organism=Clytia hemisphaerica|type=polypeptide|length=189bp
NLSPTIALQSKPYCHLTIPACTKGHELVYSYYKEQNWTRSFGFHCQKCQQ
HFYKKIENNTKCLPCSAHFFSTTDRQSCYDPYTSIFLAFGESKEFWIYTI
LATIHGIFIFISFITFHRNQHTPLVRASQRNISYVQMVTHIFLTFVPIIL
FTGQPSESKCFARPYVIGILFSITTAINLGKIQKVLVIF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009107XLOC_009107Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016325TCONS_00016325Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011641Tyr-kin_ephrin_A/B_rcpt-like
IPR017978GPCR_3_C
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likeSMARTSM01411GCC2_GCC3_2coord: 42..78
e-value: 0.0023
score: 27.2
IPR017978GPCR family 3, C-terminalPFAMPF000037tm_3coord: 108..189
e-value: 8.4E-11
score: 42.0
IPR017978GPCR family 3, C-terminalPROSITEPS50259G_PROTEIN_RECEP_F3_4coord: 99..189
score: 12.667
NoneNo IPR availableGENE3D2.10.50.10coord: 21..92
e-value: 5.2E-5
score: 23.0

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016325-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top