TCONS_00016324-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016324-protein
Unique NameTCONS_00016324-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length322

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016324-protein ID=TCONS_00016324-protein|Name=TCONS_00016324-protein|organism=Clytia hemisphaerica|type=polypeptide|length=322bp
MEANSLFLILTLKYLLVGKIFGTIFNLIGTDRSITGTPFHSIEGAPHQKC
FSVCHYLSQCFSFEVSRSSTFIGCLFYRQSYHESMTLVNKPGVKYYSLRI
AKDCTELYQQGKRTNGVYEVYILGIYRKQVYCEMEMAGGGWMVFQKRFDG
TVDFYNATWNTYKEGFGEASGEYWLGNKWLNLLTTSEKYDYLVWAKAFDG
DTRIKKMLGVRVENEDEGFKITFEEETQEFLPNQLYGMAHMNGMKFSTLD
NRDDFWSNPDGCAFYFGPWWHKGCHTVAMNGQYNHDGVTATFANGIVWIN
WKGLWTSLKESQIMIRPRSFNP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009106XLOC_009106Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016324TCONS_00016324Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 99..318
e-value: 3.7E-44
score: 162.7
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 101..318
e-value: 2.1E-49
score: 168.2
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 95..319
score: 39.638
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainCDDcd00087FReDcoord: 102..318
e-value: 4.2597E-65
score: 205.552
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 96..319
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 77..246
e-value: 3.2E-41
score: 140.9
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 247..309
e-value: 3.4E-15
score: 55.4

Blast
[Close]
BLAST of TCONS_00016324-protein vs. Swiss-Prot (Human)
Match: FBCD1 (Fibrinogen C domain-containing protein 1 OS=Homo sapiens GN=FIBCD1 PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 9.567e-40
Identity = 85/225 (37.78%), Postives = 129/225 (57.33%), Query Frame = 0 
Query:  102 KDCTELYQQGKRTNGVYEV----YILGIYRKQVYCEMEMAGGGWMVFQKRFDGTVDFYNATWNTYKEGFGEASGEYWLGNKWLNLLTTSEKYDYLVWAKAFDGDTRIKK--MLGV---RVENEDEGFKITFEEETQEFLPNQLYGMAHMNGMKFSTLDNRDDFWSNPDGCAFYFGPWWHKGCHTVAMNGQYNHDGVTATFANGIVWINWKGLWTSLKESQIMIRP 317
            +DC ++   G++ +GVY V    Y  G    QVYC+M   GGGW VFQ+R DG+V+F+   W+ Y++GFG  +GE+WLG K ++ LTT   Y+  V  + F+  T   +    GV    V+ E++G+ +T      ++       +   +GM+F+T D RD   S  +  AFY G WW++ CHT  +NGQY   G  A++A+G+ W +W G   SLK S++ IRP
Sbjct:  242 RDCLDVLLSGQQDDGVYSVFPTHYPAGF---QVYCDMRTDGGGWTVFQRREDGSVNFFRG-WDAYRDGFGRLTGEHWLGLKRIHALTTQAAYELHVDLEDFENGTAYARYGSFGVGLFSVDPEEDGYPLTVA----DYSGTAGDSLLKHSGMRFTTKD-RDSDHSENNCAAFYRGAWWYRNCHTSNLNGQYLR-GAHASYADGVEWSSWTGWQYSLKFSEMKIRP 456
The following BLAST results are available for this feature:
BLAST of TCONS_00016324-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBCD19.567e-4037.78Fibrinogen C domain-containing protein 1 OS=Homo s... [more]
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