TCONS_00016322-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016322-protein
Unique NameTCONS_00016322-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length373

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016322-protein ID=TCONS_00016322-protein|Name=TCONS_00016322-protein|organism=Clytia hemisphaerica|type=polypeptide|length=373bp
MKARENSSVVVIYLLILNLTNILFSGEIIFKDVKFKYPSRPKDQVLKGLN
LTIKPNQTTAIVGHSGAGKSTMAKLITRIYDPTSGSITVDGKDLRSLDLE
YYRSKLAVVDQFPSLFNRQLFDNIAYGKVDSDQCTLEEVEAAGKLANCDF
ISKFREGYQTFAGYCGHELSGGQLQRVAIARAAIRDPKILVLDEATSSLD
AENEKEVQVALEKLMKGRTVIVIAHRLSTIRNADNIVCMKDGNVVEQGTH
DELIEKKGAYYNLISQQIMQEKKECQKCGEWIDDGNDYPEEHPEEENPEN
ESGENPVVENEGLEKDDDQNRKSDSAENIVNIDLPKLKDGRKSKLNMMQK
LRRRITRSKSMKKSRQANAEDVQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009104XLOC_009104Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016322TCONS_00016322Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003439ABC_transporter-like
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 55..243
e-value: 5.5E-17
score: 72.4
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 46..197
e-value: 9.7E-34
score: 116.7
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 28..266
score: 25.504
NoneNo IPR availableGENE3D3.40.50.300coord: 21..273
e-value: 6.0E-77
score: 258.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..373
NoneNo IPR availableCDDcd03249ABC_MTABC3_MDL1_MDL2coord: 28..267
e-value: 1.19314E-126
score: 366.094
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 169..183
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 22..268

Blast
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BLAST of TCONS_00016322-protein vs. Swiss-Prot (Human)
Match: MDR1 (Multidrug resistance protein 1 OS=Homo sapiens GN=ABCB1 PE=1 SV=3)

HSP 1 Score: 257.684 bits (657), Expect = 6.488e-77
Identity = 128/256 (50.00%), Postives = 179/256 (69.92%), Query Frame = 0 
Query:   26 GEIIFKDVKFKYPSRPKDQVLKGLNLTIKPNQTTAIVGHSGAGKSTMAKLITRIYDPTSGSITVDGKDLRSLDLEYYRSKLAVVDQFPSLFNRQLFDNIAYGKVDSDQCTLEEVEAAGKLANC-DFISKFREGYQTFAGYCGHELSGGQLQRVAIARAAIRDPKILVLDEATSSLDAENEKEVQVALEKLMKGRTVIVIAHRLSTIRNADNIVCMKDGNVVEQGTHDELIEKKGAYYNLISQQIMQEKKECQKCGE 280
            G + F++V F YPSR + ++LKGLNL ++  QT A+VG+SG GKST  +L+ R+YDPT G ++VDG+D+R++++ + R  + VV Q P LF   + +NI YG+   +  T++E+E A K AN  DFI K    + T  G  G +LSGGQ QR+AIARA +R+PKIL+LDEATS+LD E+E  VQVAL+K  KGRT IVIAHRLST+RNAD I    DG +VE+G HDEL+++KG Y+ L++ Q    + E +   +
Sbjct:  390 GNLEFRNVHFSYPSRKEVKILKGLNLKVQSGQTVALVGNSGCGKSTTVQLMQRLYDPTEGMVSVDGQDIRTINVRFLREIIGVVSQEPVLFATTIAENIRYGR---ENVTMDEIEKAVKEANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQVALDKARKGRTTIVIAHRLSTVRNADVIAGFDDGVIVEKGNHDELMKEKGIYFKLVTMQTAGNEVELENAAD 642

HSP 2 Score: 237.269 bits (604), Expect = 1.002e-69
Identity = 122/243 (50.21%), Postives = 168/243 (69.14%), Query Frame = 0 
Query:   26 GEIIFKDVKFKYPSRPKDQVLKGLNLTIKPNQTTAIVGHSGAGKSTMAKLITRIYDPTSGSITVDGKDLRSLDLEYYRSKLAVVDQFPSLFNRQLFDNIAYGKVDSDQCTLEEVEAAGKLANCD-FISKFREGYQTFAGYCGHELSGGQLQRVAIARAAIRDPKILVLDEATSSLDAENEKEVQVALEKLMKGRTVIVIAHRLSTIRNADNIVCMKDGNVVEQGTHDELIEKKGAYYNLISQQ 267
            G + F +V F YP+RP   VL+GL+L +K  QT A+VG SG GKST+ +L+ R YDP +G + +DGK+++ L++++ R+ L +V Q P LF+  + +NIAYG  +S   + EE+  A K AN   FI      Y T  G  G +LSGGQ QR+AIARA +R P IL+LDEATS+LD E+EK VQ AL+K  +GRT IVIAHRLSTI+NAD IV  ++G V E GTH +L+ +KG Y++++S Q
Sbjct: 1033 GNVTFGEVVFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPLAGKVLLDGKEIKRLNVQWLRAHLGIVSQEPILFDCSIAENIAYGD-NSRVVSQEEIVRAAKEANIHAFIESLPNKYSTKVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGRVKEHGTHQQLLAQKGIYFSMVSVQ 1274
The following BLAST results are available for this feature:
BLAST of TCONS_00016322-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MDR16.488e-7750.00Multidrug resistance protein 1 OS=Homo sapiens GN=... [more]
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