TCONS_00016034-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016034-protein
Unique NameTCONS_00016034-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length279

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016034-protein ID=TCONS_00016034-protein|Name=TCONS_00016034-protein|organism=Clytia hemisphaerica|type=polypeptide|length=279bp
GVTELFTGLGFMAGPALGGVLYQHGGFKMPFLVCGGLVIVVLFCVFWILP
SEESYHNDNTDGKDEELTPISQALRIPGIAAIAVCIVTGGMALSFFDPTL
APYLKKIDPDIQAQQIGLVFMSIAGVYMFVAPIIGYIADKSIPGRVCIII
GQFGLCIGFCFIGPSPFLEKFIPAKVWLVAVSGGFIGLAIAPFVVPTLPD
MQKTGRRGGLPATLGTDSLISGLFNGFFSIGSVLGPTIGGALSQQYSFEG
AAMLFGFLFAAEGIFLGIFTLWERNTKWG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008960XLOC_008960Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016034TCONS_00016034Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 66..278
e-value: 3.7E-19
score: 68.3
NoneNo IPR availableGENE3D1.20.1250.20coord: 1..65
e-value: 1.5E-9
score: 37.0
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 4..197
e-value: 3.3E-21
score: 75.5
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 1..53
score: 8.783
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 1..269
e-value: 4.65752E-11
score: 60.0201
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 2..273

Blast
[Close]
BLAST of TCONS_00016034-protein vs. Swiss-Prot (Human)
Match: S18B1 (MFS-type transporter SLC18B1 OS=Homo sapiens GN=SLC18B1 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 5.607e-31
Identity = 91/281 (32.38%), Postives = 153/281 (54.45%), Query Frame = 0 
Query:    1 GVTELFTGLGFMAGPALGGVLYQHGGFKMPFLVCGGLVIVVLFCVFWILPSEESYHNDNTDGKDEELTPISQALRIPGIAAIAVCIVTGGMALSFFDPTLAPY-LKKIDPDIQAQQIGLVFMSIAGVYMFVAPIIGYIADKSIPGRVCIIIGQFGLCIG---FCFIGPSPFLEKFIPAKVWLVAVSGGFIGLAIAPFVVPTLPDMQKTGRRGGLPATLGTDSLISGLFNGFFSIGSVLGPTIGGALSQQYSFEGAAMLFGFLFAAEGIFLGIFTLWERNTK 277
            G  E F+GLG + GP +GG LYQ  G+++PF+V G +V++++    +ILP+ ES   +++  K          + +P +  IA  I +      F DPTL+ + L+K +  + A  +GLVF+ +A  Y   +P+ G ++DK  P R  +++  FG  I    +  +GP P L   I +++WL+ +     GL+    ++PT P++       G    L T  L+SGLF+  +SIG+ +GPT+GG L ++  FE AA + G      G+ +G+F L E + +
Sbjct:  168 GSLETFSGLGLILGPPVGGFLYQSFGYEVPFIVLGCVVLLMVPLNMYILPNYESDPGEHSFWK---------LIALPKVGLIAFVINSLSSCFGFLDPTLSLFVLEKFN--LPAGYVGLVFLGMALSYAISSPLFGLLSDKRPPLRKWLLV--FGNLITAGCYMLLGPVPILH--IKSQLWLLVLILVVSGLSAGMSIIPTFPEILSCAHENGFEEGLSTLGLVSGLFSAMWSIGAFMGPTLGGFLYEKIGFEWAAAIQGLWALISGLAMGLFYLLEYSRR 433
The following BLAST results are available for this feature:
BLAST of TCONS_00016034-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S18B15.607e-3132.38MFS-type transporter SLC18B1 OS=Homo sapiens GN=SL... [more]
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