TCONS_00016032-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016032-protein
Unique NameTCONS_00016032-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length214

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016032-protein ID=TCONS_00016032-protein|Name=TCONS_00016032-protein|organism=Clytia hemisphaerica|type=polypeptide|length=214bp
MPKIRRSNSDETHNKTPTPTPSFSRSLSHDVSQVDGNLLVERKNSFHVRP
TSFCRQSSLIDKNAIQNRESDKDQPKLIQNTKQLVILIGMALIEFSGTCG
MSVIAPFFANEAASKHASQTMVGLIFAVYPLFVFLLSPIVGKWMPRLGVK
FCLIAGCFLEGGTEILFGFVEDLPSGPVFVVFCFVIRIVMAIGSALSATA
SLSILTVTFKDHIG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008959XLOC_008959Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016032TCONS_00016032Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 92..210
e-value: 1.4E-9
score: 37.2
NoneNo IPR availableGENE3D1.20.1250.20coord: 62..213
e-value: 4.0E-16
score: 58.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 82..214
score: 8.719
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 87..212
e-value: 4.57711E-11
score: 58.8645
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 65..209

Blast
[Close]
BLAST of TCONS_00016032-protein vs. Swiss-Prot (Human)
Match: S18B1 (MFS-type transporter SLC18B1 OS=Homo sapiens GN=SLC18B1 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.083e-25
Identity = 53/144 (36.81%), Postives = 84/144 (58.33%), Query Frame = 0 
Query:   70 SDKDQPKLIQNTKQLVILIGMALIEFSGTCGMSVIAPFFANEAASKHASQTMVGLIFAVYPLFVFLLSPIVGKWMPRLGVKFCLIAGCFLEGGTEILFGFVEDLPSGPVFVVFCFVIRIVMAIGSALSATASLSILTVTFKDHI 213
            S  + P  +   +Q+ +LI  A +        S++ PFF  EA  K AS T++G+IF  + LF  L S + G ++  +G KF  +AG F+ GG  ILFG ++ +P GPVF+  CF++R++ A+  A + TAS SIL   F +++
Sbjct:   21 SAGETPGWLSR-EQVFVLISAASVNLGSMMCYSILGPFFPKEAEKKGASNTIIGMIFGCFALFELLASLVFGNYLVHIGAKFMFVAGMFVSGGVTILFGVLDRVPDGPVFIAMCFLVRVMDAVSFAAAMTASSSILAKAFPNNV 163
The following BLAST results are available for this feature:
BLAST of TCONS_00016032-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S18B11.083e-2536.81MFS-type transporter SLC18B1 OS=Homo sapiens GN=SL... [more]
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