TCONS_00015956-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015956-protein
Unique NameTCONS_00015956-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length404

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015956-protein ID=TCONS_00015956-protein|Name=TCONS_00015956-protein|organism=Clytia hemisphaerica|type=polypeptide|length=404bp
MDNLPNELISNIISYLDIKSAKQISFTSKKLRTLALQRMWSKPRFNRHNK
DMDFVQQISRFPIREIHTRQLSCCSWLELVAMLPHLKLLHIDTVNYYEKA
VTAQQSQLRFITQLPVVVNTNAFKMTNNGEIMQLYECMKSINVERMIINH
DCFRYTQHRWTFDQFKMFADKFSISFLVVDCIFVNEENVEDFIRTVAHLG
KCKVVLKEPIYEDGSYLYTLKDIELMVKLNIRVTKIESRSLRIENDVPTL
LKFADLFRQMKYLKDISFGHGDFEKGNLPPMEKLIDLPFTTISTWNFAVE
KWNIKSMVDILHRMKYLKEFSIETNYDVNYKLSVEEFSWFKTLPVNLVYL
EALDLTKVNIPEFREIMKGMRIKTVDYFEENFEDADFEIDIKYYGPIGDE
YSTV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008916XLOC_008916Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015956TCONS_00015956Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR032675L_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 4..47
e-value: 0.0025
score: 27.1
IPR001810F-box domainPFAMPF12937F-box-likecoord: 2..45
e-value: 9.7E-6
score: 25.3
IPR001810F-box domainPROSITEPS50181FBOXcoord: 1..43
score: 11.644
IPR001810F-box domainSUPERFAMILY81383F-box domaincoord: 1..50
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 1..376
e-value: 2.3E-14
score: 52.5

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015956-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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