TCONS_00015925-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00015925-protein
Unique Name	TCONS_00015925-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	314

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00015925-protein ID=TCONS_00015925-protein|Name=TCONS_00015925-protein|organism=Clytia hemisphaerica|type=polypeptide|length=314bp
MSELTKKTNGKKRAAKRKEEKMVESPPSSENEMSVSENESESERDQQMEA
DDHTQNIDVEFEAFPPEENDFHGLKQLLLRPFVTLHVDVSDMSDLIISQK
DMGSTIKIVDDEEDNVYGIVTILHMDRYKERPCIKELKKALLGKCKCKET
TSKMELIFNNKRVGYFINERFINLPDQLAPPFHNSIKSEFDQAIKQDKTN
DIDYLLFVSKTMRPTKAVPMKEGTSTQQETEKGKKKKTKHVNEMREENEV
DYTNFEEEIYFKASELSFSYCVTQATGFAHAGGWDFVDQPMNTYRTVFLV
PKHKWKDILKEISG

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008893	XLOC_008893	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00015925	TCONS_00015925	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025602	BCP1_family

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025602	BCP1 family	PIRSF	PIRSF028983	BCP1	coord: 4..314 e-value: 7.9E-59 score: 197.0
IPR025602	BCP1 family	PFAM	PF13862	BCIP	coord: 57..260 e-value: 7.9E-51 score: 172.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51

Blast

[Close]

BLAST of TCONS_00015925-protein vs. Swiss-Prot (Human)
Match: BCCIP (BRCA2 and CDKN1A-interacting protein OS=Homo sapiens GN=BCCIP PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.809e-31
Identity = 77/269 (28.62%), Postives = 140/269 (52.04%), Query Frame = 0

Query:   58 DVEFEAFPPEENDFHGLKQLLLRPFVTLHVDVSDMSDLIISQKDMGSTIKIVDDEEDN--------VYGIVTILHMDRYKERPCIKELKKALLGKCK--C-KETTSKMELIFNN--KRVGYFINERFINLPDQLAPPFHNSIKSEFDQAIKQDK-TNDIDYLLFVSKTMRPTKAVPMKEGTSTQQETEKGKKKKTKHVNEMREENEVDYTNFEEEIYFKASELSFSYCVTQATGFAHAGGWDFVDQPMNTYRTVFLVPKHKWKDILKEI 312
            ++EFEA+   +ND+ G+K+LL + F+   V+ ++++DL+I Q  +GS IK  D  ED+        V+G +++L++   K   C++++++ +L  C+  C K    +++   N+  K VG  ++ERFIN+P Q+A P +  ++ E   A + +K      + L +SKT                   E GK    K  +  ++   + + N EEE +++ + L F+Y V + +     G W F D PM   RTV L+P  K  +I+ ++
Sbjct:   58 NIEFEAYSLSDNDYDGIKKLLQQLFLKAPVNTAELTDLLIQQNHIGSVIKQTDVSEDSNDDMDEDEVFGFISLLNLTERKGTQCVEQIQELVLRFCEKNCEKSMVEQLDKFLNDTTKPVGLLLSERFINVPPQIALPMYQQLQKELAGAHRTNKPCGKCYFYLLISKTF-----------------VEAGKNNSKKKPSNKKKA-ALMFANAEEEFFYEKAILKFNYSVQEESDTCLGGKWSFDDVPMTPLRTVMLIPGDKMNEIMDKL 308

The following BLAST results are available for this feature:

BLAST of TCONS_00015925-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00015925-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
BCCIP	3.809e-31	28.62	BRCA2 and CDKN1A-interacting protein OS=Homo sapie...	[more]

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TCONS_00015925-protein (polypeptide) - C. hemisphaerica