TCONS_00015905-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015905-protein
Unique NameTCONS_00015905-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length543

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015905-protein ID=TCONS_00015905-protein|Name=TCONS_00015905-protein|organism=Clytia hemisphaerica|type=polypeptide|length=543bp
MSNLSLYXGIAGVVDKKLFECPICLCIIRKAKELPCEHLMCSECLLYYEN
KEIEKVKSRGLDEKDAEFLCSICQKRYHRNKKVAVKFMDRLIQNDTQFKC
LQTECKWIGSLNDYKVHKRKCFEEVECQYSSFGCRQKLNKGKVKNHNEEN
QDHHEILLLKTVQNLVEERRENRQLIQNLEQHAVKTDQELSMLKTENKDL
ESKVENHSAHLKLEQILNTIESYQELQKMVMNDSTELKTKVKKQSDLLTK
MEQKLCDSDDKQQQTLKNRITQLERENSNLRQNIDRQKARINQLESQMNN
YVKKSEFEESTEEWKNKLVEVEKDVINLKIFAEQASQLHTGICNWNTMDY
CSGIIYQKRYEKIQSVKSWSEFVEKISASDYNGSCEYLQNMVRAIADYSN
YTIYPETYASRLEVLANSLEKGTHREDFLKINTCYDFNEISVVFLSDEED
TNFMKKLSSEGDDWYRQSPIMATRYVDERFEIAVELGFDREHIYLLHDYE
ESESVKIPVNGEAISLYGPSYQILNSTCIIFDLQGREKRIGLS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008886XLOC_008886Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015905TCONS_00015905Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR018957Znf_C3HC4_RING-type
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 256..324
NoneNo IPR availableCOILSCoilCoilcoord: 162..210
NoneNo IPR availableGENE3D1.20.5.50coord: 253..338
e-value: 1.0E-4
score: 21.5
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 16..91
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 21..73
e-value: 2.2E-4
score: 30.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 21..74
score: 9.199
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 20..46
e-value: 0.00230915
score: 35.114
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 21..50
e-value: 1.0E-4
score: 22.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 14..86
e-value: 1.2E-7
score: 30.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 90..146
e-value: 2.2E-8
score: 33.7
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 36..45

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015905-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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