TCONS_00015894-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015894-protein
Unique NameTCONS_00015894-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length421

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015894-protein ID=TCONS_00015894-protein|Name=TCONS_00015894-protein|organism=Clytia hemisphaerica|type=polypeptide|length=421bp
MEVPGELGWRFSGDKSLEIGRSPVNFVQSRIDKYNSKIFSARIMNQPHIF
VTSNQGIKEILVDKSSSFEMSYKDFGYMYSLYGEVCIFNNGDEAFRLREI
IRTLFHTENCNHYMIKIQRLTQQFLKDLDQSNSIEVYETFKKLTTAICLS
VFLDIDDLELLEKYKSVATTHWHGLVSVPLSVKIKGWSSSFGKAMEAKEE
LLSLIKSQLQNKQNIGRFLEALQQAEFESIEEAASHVLLFVSALIPKALS
SLLTSTVIETQGESKEQLRNLAWTDSRILNDILLEASRLYPPFYGGRRIA
NENVNIDGYLIPEGHQVIYITRFGNRDKEAFDNADQFLPERWQGVDINKR
DLVWTFGGGKRVCVGTEFINRILKHVMSFLLSEYKWEIEGDVPLYKMLPV
SRPKQTVHVKFTRNSINHDEV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008878XLOC_008878Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015894TCONS_00015894Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002397Cyt_P450_B
IPR001128Cyt_P450
IPR017972Cyt_P450_CS
Vocabulary: Molecular Function
TermDefinition
GO:0020037heme binding
GO:0005506iron ion binding
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002397Cytochrome P450, B-classPRINTSPR00359BP450coord: 354..363
score: 39.56
coord: 298..325
score: 29.92
coord: 326..341
score: 35.83
IPR001128Cytochrome P450PFAMPF00067p450coord: 278..410
e-value: 6.8E-21
score: 74.4
coord: 22..156
e-value: 1.6E-7
score: 30.4
IPR001128Cytochrome P450SUPERFAMILY48264Cytochrome P450coord: 3..413
NoneNo IPR availableGENE3D1.10.630.10coord: 1..421
e-value: 3.8E-53
score: 180.2
IPR017972Cytochrome P450, conserved sitePROSITEPS00086CYTOCHROME_P450coord: 356..365

Blast
[Close]
BLAST of TCONS_00015894-protein vs. Swiss-Prot (Human)
Match: CP26B (Cytochrome P450 26B1 OS=Homo sapiens GN=CYP26B1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.864e-20
Identity = 103/438 (23.52%), Postives = 180/438 (41.10%), Query Frame = 0 
Query:   25 NFVQSRIDKYNSKIFSARIMNQPHIFVTSNQGIKEILVDKSSSFEMSYKDFGYMYSLYGEVCIFNN-GDEAFRLREIIRTLFHTENCNHYMIKIQRLTQQFLKDLD-QSNSIEVYETFKKLTTAICLSVFLDI----DDL-ELLEKYKSVATTHWHGLVSVPLSVKIKGWSSSFGKAMEAKEELLSLIKSQLQNKQNIGRFLEAL-----------QQAEFESIEEAASHV------------------LLFVSALIPKALSSLLTSTVIETQGESKE-QLRNLAWTDSRILNDILLEASRLYPPFYGGRRIANENVNIDGYLIPEGHQVIYITRFGNRDKEAFDNADQFLPERWQGV---DINKRDLVWTFGGGKRVCVGTEFINRILKHVMSFLLSEYKWEIEGDV-PLYKMLPVSRPKQTVHVKFTRNSINHDEV 421
             F  SR +KY + +F   ++ +P I VT  + +++IL+ +       +     M  L G   + N+ GD     R++   +F  E    Y+ KIQ + Q  L+       +I VY+  +KLT  + + V L      +DL  L E Y+         + S+P+ +   G+          ++ L   I+ +LQ  Q    +L+AL           ++   + +++    +                  LL    ++ K    L    ++ + G   E  LR    +  R L+ ++ E  RL+ P  GG R   +   +DG+ IP+G  V+Y  R  +     F + + F P+R+      D + R     FGGG R C+G       LK +   L S  ++E+     P   ++PV  P   + VKF     N +E+
Sbjct:   71 GFQSSRREKYGN-VFKTHLLGRPLIRVTGAENVRKILMGEHHLVSTEWPRSTRM--LLGPNTVSNSIGDIHRNKRKVFSKIFSHEALESYLPKIQLVIQDTLRAWSSHPEAINVYQEAQKLTFRMAIRVLLGFSIPEEDLGHLFEVYQQFVDN----VFSLPVDLPFSGYRRGIQARQILQKGLEKAIREKLQCTQG-KDYLDALDLLIESSKEHGKEMTMQELKDGTLELIFAAYATTASASTSLIMQLLKHPTVLEKLRDELRAHGILHSGGCPCEGTLRLDTLSGLRYLDCVIKEVMRLFTPISGGYRTVLQTFELDGFQIPKGWSVMYSIRDTHDTAPVFKDVNVFDPDRFSQARSEDKDGRFHYLPFGGGVRTCLGKHLAKLFLKVLAVELASTSRFELATRTFPRITLVPVLHPVDGLSVKFFGLDSNQNEI 500
The following BLAST results are available for this feature:
BLAST of TCONS_00015894-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CP26B8.864e-2023.52Cytochrome P450 26B1 OS=Homo sapiens GN=CYP26B1 PE... [more]
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