TCONS_00015827-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00015827-protein
Unique Name	TCONS_00015827-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	604

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00015827-protein ID=TCONS_00015827-protein|Name=TCONS_00015827-protein|organism=Clytia hemisphaerica|type=polypeptide|length=604bp
MADLEGLNSRVSSFRLQENVLVYNQMKVCLTQAFMFLNEYQWIANSYVAE
FFTQDLWSRLPEAWRKCFEEATLDDIANNILLSSAHKSYKSVWPLSLLSF
IATCHGLSLNRQQKEEFKNPTKLPKEIADVFKKHIKPKKRHELAILPDLV
NHVCERTKVKNVVDVGSGLGHMARVLAYKYGCNVTAVERTEEQLPIARQY
DLQIEKELRRFREKGSFLDKEGKVRHVAKEIHLNMTSGEFSFLIGQENNE
MKDNSTYNNTTLKNRMLNGGGDTVKDEKDSLIDQKLKNNESHQQSHMIDL
ENKQTVSADLIGLENNSNQCTLIGLHTCGDLASTMLKVFKKTEHVKNIIS
VSCCYFRMTLKSEIKKEVNEDNPLHTKTENSDILVKDRLCFDSFSLKTLH
SNYKYLENEIHPNGDNHMKVFNGNTTVEQSSEFYGFPMSDFIRKIPVQPL
KYKSFETACHFLGDYADKLLGNSPNIKLHCYRAIMEVFIRHVDPSLVLAA
IRCKKIKNASAMSFEEYAAKVFERLKLPFHESQLEEINYKEMLKQTKNVT
VIHSLALLLGPLIESIALMDKYMFLVESGFETELIPIFDPKISPRNFAVI
ATRN

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008851	XLOC_008851	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00015827	TCONS_00015827	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025714	Methyltranfer_dom
IPR029063	SAM-dependent_MTases

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.150		coord: 110..304 e-value: 8.0E-9 score: 34.8
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 161..219 e-value: 8.46699E-5 score: 40.1059
IPR025714	Methyltransferase domain	PFAM	PF13679	Methyltransf_32	coord: 138..359 e-value: 1.7E-20 score: 73.5
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 121..207

Blast

[Close]

BLAST of TCONS_00015827-protein vs. Swiss-Prot (Human)
Match: RRNAD (Protein RRNAD1 OS=Homo sapiens GN=RRNAD1 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.458e-26
Identity = 63/177 (35.59%), Postives = 100/177 (56.50%), Query Frame = 0

Query:  431 SEFYGFPMSDFIRKIPVQPLKYKSFETACHFLGDYADKLLGNSPNIKLHCYRAIMEVFIRHVDPSLVLAAIRCKKIKNASAMSFEEYAAKVFERL----KLPFHESQLEEINYKEMLKQTKNVTVIHSLALLLGPLIESIALMDKYMFLVESGFETELIPIFDPKISPRNFAVIATR 603
            S+  G+P+S ++  +P   L Y+  E ACH L +YA++L    P ++ HCYRA +E  IR   P L    +  + I     +  EEY  +  +R+    +LP + + L+       + Q   V    SLALLL PL+E++ L+D+ ++L E GF  EL+PIF P++SPRN  ++AT+
Sbjct:  291 SDPGGYPLSQWVAGLPGYELPYRLREGACHALEEYAERLQKAGPGLRTHCYRAALETVIRRARPELRRPGV--QGIPRVHELKIEEYVQRGLQRVGLDPQLPLNLAALQA-----HVAQENRVVAFFSLALLLAPLVETLILLDRLLYLQEQGFHAELLPIFSPELSPRNLVLVATK 460

HSP 2 Score: 107.071 bits (266), Expect = 1.527e-24
Identity = 67/199 (33.67%), Postives = 109/199 (54.77%), Query Frame = 0

Query:   24 NQMKVCLTQAFMFLNEYQWIANSYVAEFFTQDLWSRLPEAWRKCFEEATLDDIANNILLSSAHKS---YKSVWPLSLLSFIATCHGLSLNR----QQKEEF-KNPTKLPKEIADVFKKHIKPKKRHELAILPDLVNHVCERTKVKNVVDVGSGLGHMARVLAYKYGCNVTAVERTEEQLPIARQYDLQ----IEKELRR 210
             Q+ V LT+       Y+ I ++Y+ EFFT +LW  LP +W++  +      +A  +L          Y+SVWPL+LL+  +T   L+  R    Q   EF +NP++  +  A  F+KH++PKK+HE+  L +LV  + + T    VVDVGSG GH++R +A   G  V ++E  +  +  A++ D +    +EKE +R
Sbjct:   15 KQLAVNLTRVLAL---YRSILDAYIIEFFTDNLWDTLPCSWQEALDGLKPPQLATMLLGMPGEGEVVRYRSVWPLTLLALKSTACALAFTRMPGFQTPSEFLENPSQSSRLTAP-FRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSGQGHLSRFMALGLGLMVKSIEGDQRLVERAQRLDQELLQALEKEEKR 209

The following BLAST results are available for this feature:

BLAST of TCONS_00015827-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00015827-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
RRNAD	1.458e-26	35.59	Protein RRNAD1 OS=Homo sapiens GN=RRNAD1 PE=2 SV=2	[more]

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TCONS_00015827-protein (polypeptide) - C. hemisphaerica