TCONS_00015806-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00015806-protein
Unique Name	TCONS_00015806-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1090

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00015806-protein ID=TCONS_00015806-protein|Name=TCONS_00015806-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1090bp
FRSMKYCKDKTKRNKKFNDASTRTRNETDKKRKESNSVRSYFNQTFRSLA
RKIPHNRRFGRNYFKIICNQMPDVILWRERNKSSAAFAKMMELRRFISNL
CSTTNKSEPSENEHLISNNSQTQLNYGITDLTPIYYSNFTMTRKPSERHV
PPEYGWKVKLNHEFEERPRVFVFPRLSQVTKLAGMAYRYVKFTHRERRKG
KAPIIDPYAVGACKQIYGVPLGGIGAGTIGRGWKGDFNRWQLVPGMYTYN
TVEVNQFTVCIRKNGKTVYQHVLSPNLPKGRMNCDKNLQSWRWAFDGGRA
TYHALYPRAWTVYEIPQYSLRLTCRQVSPIFPNDYKDTSMPVGVFVWTAE
NLGCEDLEVSIMLTFQNGFGTTEDTAGGLYNEEFFCKGVYSEIKLEQTEG
DNLTDFKEHQRKSNEPPSMPQIIENEEMTNSIDGKTNEEESSSTDESSPE
SRYFADQDQENDVIKDDNENNQSKKTFERCQSKENCTVHDVVGVLLHHEG
LKQKYTLSIAAMQVTEDAQQLVDVTTKVGFDPKSPCSKLWEDLWEDGKLT
NKVGDQNNKKTYPGQALAAAVAAKVIVKAESKAEMQFAIAWDQPVIKFGA
KSDVHYCRRYTRFFGNKGNACPAMCCYTFQNLSTWEEKIEKWQNPILNDC
DLPAWFKSALFNELYFISDGGTVWLDIKRKKDSHGNLIPEHVKKYGRFAY
LEGHEYRMYNTYDVHFYASWALIMLWPKLQQSLQYDIATSVLDTDNEIRV
MMMSGEKAYRKVPGCVPHDVGDPDDEPFIRVNAYCIHDTSCWKDLNLHFV
LQVYRDYHLTNDKQFLMDMWPAVKSVMAYSMKQDTDGDGIIDNSGFADNT
FDCWIVTGPSAYTGGLWLSALKCTIKIADILDLSDSLLKYNGVLERGRRA
FERKLWNGQYFNYDGSEKEHHNSIMAGQCAGQWYLHACDLGQKEDDIVFK
REQIKSTLKVIFQNNVMRFEGGFMGAVNGMRADGTIDKDSLQAEEVWTGV
TYALAATMIQQGMIREGFRTAEGVYRTVYEKWGLGFQTPEAFTAKKTFRS
RGYMRPLSIWSMYHAHEQRKLSTIENEEDPKFSKNGEPIC

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008841	XLOC_008841	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00015806	TCONS_00015806	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024462	GH116_N
IPR006775	GH116_catalytic
IPR008928	6-hairpin_glycosidase-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0003824	catalytic activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024462	Glycosyl-hydrolase family 116, N-terminal	PFAM	PF12215	Glyco_hydr_116N	coord: 218..635 e-value: 3.1E-92 score: 309.3
IPR006775	Glycosyl-hydrolase family 116, catalytic region	PFAM	PF04685	DUF608	coord: 696..1062 e-value: 2.4E-162 score: 540.1
None	No IPR available	GENE3D	1.50.10.10		coord: 537..748 e-value: 0.27 score: 10.3 coord: 758..1063 e-value: 3.2E-41 score: 141.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 404..476
IPR008928	Six-hairpin glycosidase-like	SUPERFAMILY	48208	Six-hairpin glycosidases	coord: 706..1062 coord: 633..664

Blast

[Close]

BLAST of TCONS_00015806-protein vs. Swiss-Prot (Human)
Match: GBA2 (Non-lysosomal glucosylceramidase OS=Homo sapiens GN=GBA2 PE=1 SV=2)

HSP 1 Score: 614.379 bits (1583), Expect = 0.000e+0
Identity = 302/581 (51.98%), Postives = 392/581 (67.47%), Query Frame = 0

Query:  491 VVGVLLHHEGLKQKYTLSIAAMQVTEDAQQLVDVTTKVGFDPKSPCSKLWEDLWEDGKLTNKVGDQNNKKTYPGQALAAAVAAKVIVKAESKAEMQFAIAWDQPVIKFGAKSDVHYCRRYTRFFGNKGNACPAMCCYTFQNLSTWEEKIEKWQNPILNDCDLPAWFKSALFNELYFISDGGTVWLDIKRKKDSHGNLIPEHV-----------KKYGRFAYLEGHEYRMYNTYDVHFYASWALIMLWPKLQQSLQYDIATSVLDTDNEIRVMMMSGEKAYRKVPGCVPHDVGDPDDEPFIRVNAYCIHDTSCWKDLNLHFVLQVYRDYHLTNDKQFLMDMWPAVKSVMAYSMKQDTDGDGIIDNSGFADNTFDCWIVTGPSAYTGGLWLSALKCTIKIADILDLSDSLLKYNGVLERGRRAFERKLWNGQYFNYDGSEKEHHNSIMAGQCAGQWYLHACDLGQKEDDIVFKREQIKSTLKVIFQNNVMRFEGGFMGAVNGMRADGTIDKDSLQAEEVWTGVTYALAATMIQQGMIREGFRTAEGVYRTVYEKWGLGFQTPEAFTAKKTFRSRGYMRPLSIW 1060
            V G+LLHH  L   YT+++AA          +       FDP S   ++W+DL +DG+L +  G   +  T  G  +A AV     ++   +  ++F++AWD P I FGAK  VHY RRYTRFFG  G+A PA+  Y     + WEE+I  WQ+P+L+D  LPAW+KSALFNELYF++DGGTVWL++   +DS    +PE +           + YGRF YLEG EYRMYNTYDVHFYAS+ALIMLWPKL+ SLQYD+A + L  D   R  +MSG  A  K    +PHD+GDPDDEP++RVNAY IHDT+ WKDLNL FVLQVYRDY+LT D+ FL DMWP   +VM   MK D D DG+I+N G+AD T+D W+ TGPSAY GGLWL+A+   +++A +    D   K++ +L RG+ A+ER LWNG+Y+NYD S +    S+M+ QCAGQW+L AC LG+ + + VF  + +   L+ IF+ NV  F GG MGAVNGM+  G  DK S+Q++EVW GV Y LAATMIQ+G+  EGF+TAEG YRTV+E+ GL FQTPEA+  ++ FRS  YMRPLSIW
Sbjct:  319 VRGLLLHHPTLPNPYTMAVAARVTAATTVTHI-----TAFDPDSTGQQVWQDLLQDGQLDSPTG--QSTPTQKGVGIAGAVCVSSKLRPRGQCRLEFSLAWDMPRIMFGAKGQVHY-RRYTRFFGQDGDAAPALSHYALCRYAEWEERISAWQSPVLDDRSLPAWYKSALFNELYFLADGGTVWLEVL--EDS----LPEELGRNMCHLRPTLRDYGRFGYLEGQEYRMYNTYDVHFYASFALIMLWPKLELSLQYDMALATLREDLTRRRYLMSGVMAPVKRRNVIPHDIGDPDDEPWLRVNAYLIHDTADWKDLNLKFVLQVYRDYYLTGDQNFLKDMWPVCLAVMESEMKFDKDHDGLIENGGYADQTYDGWVTTGPSAYCGGLWLAAVAVMVQMAALCGAQDIQDKFSSILSRGQEAYERLLWNGRYYNYDSSSRPQSRSVMSDQCAGQWFLKACGLGEGDTE-VFPTQHVVRALQTIFELNVQAFAGGAMGAVNGMQPHGVPDKSSVQSDEVWVGVVYGLAATMIQEGLTWEGFQTAEGCYRTVWERLGLAFQTPEAYCQQRVFRSLAYMRPLSIW 884

HSP 2 Score: 221.861 bits (564), Expect = 8.650e-60
Identity = 123/239 (51.46%), Postives = 158/239 (66.11%), Query Frame = 0

Query:  149 HVPPEYGWKVKLNHEFEERPRVFVF--PRLSQVTKLAGMAYRYVKFTHRERR-KGKAPIIDPYAVGACKQIYGVPLGGIGAGTIGRGWKGDFNRWQLVPGMYTYNTVEVNQFTVCIRKNGKTVYQHVLSPNLPKGRMNCDKNLQSWRWAFDGGRATYHALYPRAWTVYEIPQYSLRLTCRQVSPIFPNDYKDTSMPVGVFVWTAENLGCEDLEVSIMLTFQNGFGTTEDTAGGLYNEEF 384
             VPP +GW++ L HEF E+ + F      LS + K  GM  RY+++ +R+   + K P ID       +QIYG PLGGIG GTI RGW+G F RWQL PGMY + TV  +QFTVC+R+ G+TVYQ VLS   P         L+SW W   G  A YHALYPRAWTVY++P  ++ LTCRQ++PI P+DY+D+S+PVGVFVW  EN G E L+VSIM + +NG G  +D  GGL+NE F
Sbjct:   80 QVPP-FGWRICLAHEFTEKRKPFQANNVSLSNMIKHIGMGLRYLQWWYRKTHVEKKTPFIDMINSVPLRQIYGCPLGGIGGGTITRGWRGQFCRWQLNPGMYQHRTVIADQFTVCLRREGQTVYQQVLSLERPS-------VLRSWNWGLCGYFAFYHALYPRAWTVYQLPGQNVTLTCRQITPILPHDYQDSSLPVGVFVWDVENEGDEALDVSIMFSMRNGLGGGDDAPGGLWNEPF 310

The following BLAST results are available for this feature:

BLAST of TCONS_00015806-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00015806-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GBA2	8.650e-60	51.98	Non-lysosomal glucosylceramidase OS=Homo sapiens G...	[more]

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TCONS_00015806-protein (polypeptide) - C. hemisphaerica