TCONS_00015805-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015805-protein
Unique NameTCONS_00015805-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length260

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015805-protein ID=TCONS_00015805-protein|Name=TCONS_00015805-protein|organism=Clytia hemisphaerica|type=polypeptide|length=260bp
MPQNEHIELSIKRHGRKFDHYEKLRKKEGREPHKQALKAKKLTGLKAKLY
NKKRHAEKVQLKKTLKMHEEKNTKAKDTTKVPDSAVPAYLLDREGQSQAK
VLSNMIKQKRKEKAGKWDVPLPKVKAIGEDEVFRVVKTGKSKRKSWKRMV
TKVTYVGENFTRKPPKFERFIRPMGLRFKKAHVTHPELKATFCLPMIGVK
KNPQSPMYTSLGVITKGTVIEVNVSELGLVTQGGKVVWGKYAQVTNNPEN
DGCINAVLLV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008840XLOC_008840Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015805TCONS_00015805Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022309Ribosomal_S8e/biogenesis_NSA2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..78
NoneNo IPR availableCDDcd11381NSA2coord: 4..260
e-value: 0.0
score: 515.25
IPR022309Ribosomal protein S8e/ribosomal biogenesis NSA2PFAMPF01201Ribosomal_S8ecoord: 32..259
e-value: 1.3E-49
score: 167.8

Blast
[Close]
BLAST of TCONS_00015805-protein vs. Swiss-Prot (Human)
Match: NSA2 (Ribosome biogenesis protein NSA2 homolog OS=Homo sapiens GN=NSA2 PE=1 SV=1)

HSP 1 Score: 432.565 bits (1111), Expect = 1.794e-155
Identity = 205/260 (78.85%), Postives = 238/260 (91.54%), Query Frame = 0 
Query:    1 MPQNEHIELSIKRHGRKFDHYEKLRKKEGREPHKQALKAKKLTGLKAKLYNKKRHAEKVQLKKTLKMHEEKNTKAKDTTKVPDSAVPAYLLDREGQSQAKVLSNMIKQKRKEKAGKWDVPLPKVKAIGEDEVFRVVKTGKSKRKSWKRMVTKVTYVGENFTRKPPKFERFIRPMGLRFKKAHVTHPELKATFCLPMIGVKKNPQSPMYTSLGVITKGTVIEVNVSELGLVTQGGKVVWGKYAQVTNNPENDGCINAVLLV 260
            MPQNE+IEL  KR+G + D++EK RKKE RE H+++ KAKK+ GLKAKLY+K+RHAEK+Q+KKT+KMHE++NTK K+  K P  AVPAYLLDREGQS+AKVLSNMIKQKRKEKAGKW+VPLPKV+A GE EV +V++TGK K+K+WKRMVTKV +VG+ FTRKPPK+ERFIRPMGLRFKKAHVTHPELKATFCLP++GVKKNP SP+YT+LGVITKGTVIEVNVSELGLVTQGGKV+WGKYAQVTNNPENDGCINAVLLV
Sbjct:    1 MPQNEYIELHRKRYGYRLDYHEKKRKKESREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQGETEVLKVIRTGKRKKKAWKRMVTKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260
The following BLAST results are available for this feature:
BLAST of TCONS_00015805-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NSA21.794e-15578.85Ribosome biogenesis protein NSA2 homolog OS=Homo s... [more]
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