TCONS_00015674-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00015674-protein
Unique Name	TCONS_00015674-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	927

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00015674-protein ID=TCONS_00015674-protein|Name=TCONS_00015674-protein|organism=Clytia hemisphaerica|type=polypeptide|length=927bp
MFFSMDAAVNQPERVPLSKSFNPSTRLGDEIKAEEETKKKKKDYTPIIHS
PFASKKAPVLHSPIIKKEKEKKKKKRPKKVEIKEPPKIEKPPEPKPPAEP
GVPTHLDGTPLRSSEVALLKGLICKWKNYSNQRKGGEGSSQFRQGPAPLD
ELSGKSKRKFTIRCSHGTLDSDIESDEDEIDGVRKNQNASCKSLILYFAK
LAISSNEGEGIDLGFVESLIKSGADVNATDRAGQTVLHEVSKAWHTDVAK
FLLDKKAEINKGDRFGRTPLHLSAAVGYVEMVEFLIANGANINQKTKGEK
QTPIHYAARNNAVATLKVLLRLGASITDRDYKARTPLFVAAENGRQEAAR
MLLEAGAPAAVYDDEGTSCLTLMIEKMPMIALEALDQFYSEDRALRKKFY
YLNYLEKKLTTEDEEEMELKHMRRTERVKRKKQLDEQRKIAKKNEKEKIP
KDLAKSPLESIVQFTELELIMHPAVTTLIEKKWQLFGKRSSQKAVLANFI
YALVWSICGTCLPNQHSFYFPIVEWWYIMVLEAVGVFMTIYFMANQIIEG
RRTITRDKAYKNWHIEHTERDLDYCHPRWPEEKRYLDGELERLRRKKSGS
YFADGWVVIDWMIHLAVWIIVFTRVAAVVTNDPEVKKYHIRVFAFSLVII
WLRILSSCRAFKSLGPFITLLGHVVDDTIKFGFLFFEFFIPYTCAFWMLF
GGKANAEKVGDDTWLKVNDIIFSIYQMTLIESINWNLMYKMDRFMGQLLV
GSYITLSSIVCLNLYIALMADTFARVYQNAKANAMLQQSAQILKAQRSLT
KQQRIDMLQVIHEDCSPLEIYAGEEGGKQKTNPGNRVYDRVNRHTDLKIE
EIKEQLKGMQKEIVANSGKGNTRSRASSSLSLASPWQDKMDREMNNLKKV
VESLEKGQKDILQFIKDNYQSEDEYEA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008749	XLOC_008749	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00015674	TCONS_00015674	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom
IPR005821	Ion_trans_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0005216	ion channel activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport
GO:0006811	ion transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006811	ion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0005216	ion channel activity
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 887..907
None	No IPR available	COILS	Coil	Coil	coord: 842..869
None	No IPR available	GENE3D	2.40.10.190		coord: 273..289 e-value: 1.0E-5 score: 25.2
None	No IPR available	GENE3D	1.10.287.70		coord: 375..778 e-value: 1.6E-11 score: 43.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 865..888
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..109
None	No IPR available	CDD	cd00204	ANK	coord: 227..353 e-value: 5.51801E-35 score: 129.811
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 232..261 e-value: 1.7 score: 17.7 coord: 299..328 e-value: 8.0E-4 score: 28.7 coord: 265..294 e-value: 2.5E-6 score: 37.0 coord: 191..228 e-value: 2300.0 score: 2.2 coord: 332..363 e-value: 0.87 score: 18.6
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 232..264 score: 9.858
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 332..364 score: 11.06
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 299..331 score: 11.541
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 265..297 score: 14.372
IPR020683	Ankyrin repeat-containing domain	GENE3D	1.25.40.20		coord: 170..272 e-value: 6.1E-19 score: 67.4
IPR020683	Ankyrin repeat-containing domain	GENE3D	1.25.40.20		coord: 290..374 e-value: 3.1E-24 score: 84.5
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 214..295 e-value: 8.7E-14 score: 51.8 coord: 299..357 e-value: 9.7E-10 score: 38.8
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 216..370 score: 47.801
IPR020683	Ankyrin repeat-containing domain	SUPERFAMILY	48403	Ankyrin repeat	coord: 213..372
IPR005821	Ion transport domain	PFAM	PF00520	Ion_trans	coord: 597..780 e-value: 3.2E-14 score: 52.7

Blast

[Close]

BLAST of TCONS_00015674-protein vs. Swiss-Prot (Human)
Match: ANK1 (Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 3.335e-21
Identity = 61/162 (37.65%), Postives = 89/162 (54.94%), Query Frame = 0

Query:  213 LGFVESLIKSGADVNATDRAGQTVLHEVSKAWHTDVAKFLLDKKAEINKGDRFGRTPLHLSAAVGYVEMVEFLIANGANINQKTKGEKQTPIHYAARNNAVATLKVLLRLGASITDRDYKARTPLFVAAENGRQEAARMLLEAGAPAAVYDDEGTSCLTLMI 374
            L  V++L++ GA  N ++   +T LH  ++A HT+VAK+LL  KA++N   +  +TPLH +A +G+  MV+ L+ N AN N  T     TP+H AAR   V T+  LL   AS      K  TPL VAA+ G+   A +LLE  A        G + L + +
Sbjct:  417 LPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTA-GHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAV 577

HSP 2 Score: 88.9669 bits (219), Expect = 8.639e-18
Identity = 54/146 (36.99%), Postives = 81/146 (55.48%), Query Frame = 0

Query:  212 DLGFVESLIKSGADVNATDRAGQTVLHEVSKAWHTDVAKFLLDKKAEINKGDRFGRTPLHLSAAVGYVEMVEFLIANGANINQKTKGEKQTPIHYAARNNAVATLKVLLRLGASITDRDYKARTPLFVAAENGRQEAARMLLEAGA 357
            +L   + L+  GA VN T + G T LH  S+  +  + + LLD+ A+I    +   TPLH +A  G+V + E L+ +GA I  KTK    +PIH AA+ + +  +++LL+  A I D      TPL VAA  G    A++LL+ GA
Sbjct:  218 NLNVAQLLLNRGASVNFTPQNGITPLHIASRRGNVIMVRLLLDRGAQIETKTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTK-NGLSPIHMAAQGDHLDCVRLLLQYDAEIDDITLDHLTPLHVAAHCGHHRVAKVLLDKGA 362

HSP 3 Score: 87.4261 bits (215), Expect = 2.650e-17
Identity = 55/156 (35.26%), Postives = 80/156 (51.28%), Query Frame = 0

Query:  215 FVESLIKSGADVNATDRAGQTVLHEVSKAWHTDVAKFLLDKKAEINKGDRFGRTPLHLSAAVGYVEMVEFLIANGANINQKTKGEKQTPIHYAARNNAVATLKVLLRLGASITDRDYKARTPLFVAAENGRQEAARMLLEAGAPAAVYDDEGTSCL 370
             +E L+K+GA ++A   +G T LH  S   H  + K LL + A  N  +    TPLH++A  G+ E+ ++L+ N A +N K K + QTP+H AAR      +K+LL   A+         TPL +AA  G  E    LLE  A  A    +G + L
Sbjct:  386 VMELLLKTGASIDAVTESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAK-DDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPL 540

HSP 4 Score: 84.3445 bits (207), Expect = 2.407e-16
Identity = 66/261 (25.29%), Postives = 124/261 (47.51%), Query Frame = 0

Query:  218 SLIKSGADVNATDRAGQTVLHEVSKAWHTDVAKFLLDKKAEINKGDRFGRTPLHLSAAVGYVEMVEFLIANGANINQKTKGEKQTPIHYAARNNAVATLKVLLRLGASITDRDYKARTPLFVAAENGRQEAARMLLEAGAPAAVYDDEGTSCLTLMIEKMPMIALEALDQFYSEDRAL-----RKKFYYLNYLEKKLTTEDEEEMELKHMRRTERVKR-----KKQLDEQRKIAKKNEKEKIPKDLAKSPLESIVQFTELE 468
            SL++ G   NA    G T LH  ++  H ++   LL K+A  N G++ G TPLHL A  G+V + + LI +G  ++  T+    TP+H A+    +  +K LL+  A +  +     +PL  AA+ G  +   +LL+ GA       +GT+ L +  +++  I++  + +  +++ +      + +  +   +++ L   ++E  EL   +   R  R     K+ LD   K+ +  E   IP+     P   +++  E E
Sbjct:  620 SLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTR-MGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIA-KRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPETVDEILDVSEDEGEELISFKAERRDSRDVDEEKELLDFVPKLDQVVESPAIPRIPCAMPETVVIRSEEQE 878

The following BLAST results are available for this feature:

BLAST of TCONS_00015674-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00015674-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ANK1	3.335e-21	37.65	Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3	[more]

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TCONS_00015674-protein (polypeptide) - C. hemisphaerica