TCONS_00015660-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00015660-protein
Unique Name	TCONS_00015660-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1242

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00015660-protein ID=TCONS_00015660-protein|Name=TCONS_00015660-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1242bp
MASRPSSSVEDPPGKTDEIDQAKDNVDVITKPEAEDRADDENNISWKEKY
ELAEKQLKRVRQQTGKVRELLNMKMEEYEGRVVSAEKKRDEALEKLEKLE
IACEDKDEAISALREKISRMREERASLLLLDDEKMVKVKDWVKDKFTGLY
QELESVKKERDDLQERLSKDIDGRASHLSTTNSQHFYEEVFFELIDGLKK
TDTIEKDEPPRYERISLALSESDGATGFDSPLVPPRRSSIRDESRPLKPI
PAKRPVGRPKSPEVFREMFDLPEEPSRHGSLDNLDKQMLQLSTEHLEAFR
GTEVEGAGGEVAKEPTSPFYYSLHPSVSGTNYVDDQSAPVYSTLEGNPSK
RQKVRMASMIRDTPFSGDTSDSDSETLLDGPTTTSSRPNNTIELKTANNL
PVKKDLSLRSNYSAASASPPLRTCAPFTAQNMRSETLEKAGWLVKLGGRI
KNWKRRWFVLSEGKLSYYKSRGGMYGKPVGWIVIKQITQLSRSERPLTME
ITTPNRTYYLTADNKEEVTDWLRVLRNALKRFTGARLLSRVGEKTIFSGW
FTKAKCGSSKHCWAVLKEKSLLFFKTDIEQAPVGAMSLREIISVTTVEDE
APNEQESDGSCKLMVQCLKDSHPTYFVVASRSEMELWLHHLQRMCSGTDA
NNETDFEAIVSKLMKLDGDTGSRYWRSKIMVHSKQALKESLSSLPTSELE
TEAVNLWKSIQLFSTTPVNETAIDYHIALAQDVLQNCLNHAELQTEIYCQ
LIKQTSKYRGQPQPEGSTAYLNDWTSANMDEGGYGTIDLNPVSSFVYLQC
WQLLALCTSIFLPKLKILWLLKAHLHRNASESSDVGRYAIYCQRSLERTL
KNGERETKPSRMEAIALIARNPFYRIYPMSIPVYFVNNSYQVFSFDGSTT
ISEFNTNINEELGLRNNNESGFALYSDNPVAQTEHCMQGDLKLCDVISKW
EQACQKLKTGRFERSKAIKLTYKNRLFFKSSAGLQTDKEKYFTVFQVNEA
LRMGHMLPAPPVLSKLTAYFSQIAFGDYVEHFKLLEDIMQKIYPAYLKLE
QASIRRKVFKSVADDWSALKGKSIKECVHGYLHLAQAIPLYGSKLFKAQE
KLVGNADSKEPPTTIWIAIDEERLQILSKDLEPRKSYEWSNVVTFGGFKE
DFMMVVQDVLSPGDAASPGETTDVTNRHLFAMPPGRVLEVTLLIASYINA
VVQKQGLNLDASLDGFAYRGERFSDGVAKATEIHLWDMESQG

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008738	XLOC_008738	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00015660	TCONS_00015660	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000857	MyTH4_dom
IPR001849	PH_domain
IPR019749	Band_41_domain
IPR011993	PH_dom-like
IPR014352	FERM/acyl-CoA-bd_prot_3-hlx
IPR000299	FERM_domain
IPR029071	Ubiquitin-rel_dom
IPR019748	FERM_central

Vocabulary: **Cellular Component**
Term	Definition
GO:0005856	cytoskeleton

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005856	cytoskeleton

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 146..166
None	No IPR available	COILS	Coil	Coil	coord: 43..63
None	No IPR available	COILS	Coil	Coil	coord: 68..130
None	No IPR available	GENE3D	1.20.5.50		coord: 36..184 e-value: 0.0019 score: 17.5
None	No IPR available	GENE3D	3.10.20.90		coord: 877..976 e-value: 2.2E-19 score: 69.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 362..391
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	CDD	cd00821	PH	coord: 548..641 e-value: 2.94885E-5 score: 42.5298
IPR000857	MyTH4 domain	SMART	SM00139	MyTH4_1	coord: 682..868 e-value: 2.8E-22 score: 90.0
IPR000857	MyTH4 domain	PFAM	PF00784	MyTH4	coord: 728..866 e-value: 1.9E-31 score: 108.7
IPR000857	MyTH4 domain	PROSITE	PS51016	MYTH4	coord: 682..868 score: 30.813
IPR001849	Pleckstrin homology domain	SMART	SM00233	PH_update	coord: 545..648 e-value: 1.1E-9 score: 48.1 coord: 437..532 e-value: 4.4E-19 score: 79.4
IPR001849	Pleckstrin homology domain	PFAM	PF00169	PH	coord: 438..529 e-value: 1.0E-17 score: 64.5 coord: 547..645 e-value: 9.9E-9 score: 35.6
IPR001849	Pleckstrin homology domain	PROSITE	PS50003	PH_DOMAIN	coord: 436..530 score: 16.956
IPR001849	Pleckstrin homology domain	PROSITE	PS50003	PH_DOMAIN	coord: 544..646 score: 7.831
IPR019749	Band 4.1 domain	SMART	SM00295	B41_5	coord: 875..1096 e-value: 1.8E-7 score: 40.8
IPR011993	PH domain-like	GENE3D	2.30.29.30		coord: 538..659 e-value: 4.9E-12 score: 45.0
IPR011993	PH domain-like	GENE3D	2.30.29.30		coord: 1091..1202 e-value: 2.8E-6 score: 27.3
IPR011993	PH domain-like	GENE3D	2.30.29.30		coord: 350..536 e-value: 1.6E-27 score: 95.5
IPR011993	PH domain-like	SUPERFAMILY	50729	PH domain-like	coord: 433..531
IPR011993	PH domain-like	SUPERFAMILY	50729	PH domain-like	coord: 544..648
IPR014352	FERM/acyl-CoA-binding protein, 3-helical bundle	GENE3D	1.20.80.10		coord: 978..1090 e-value: 5.8E-5 score: 22.8
IPR000299	FERM domain	PROSITE	PS50057	FERM_3	coord: 879..1205 score: 27.982
IPR029071	Ubiquitin-related domain	SUPERFAMILY	54236	Ubiquitin-like	coord: 877..951
IPR019748	FERM central domain	SUPERFAMILY	47031	Second domain of FERM	coord: 973..1091

Blast

[Close]

BLAST of TCONS_00015660-protein vs. Swiss-Prot (Human)
Match: PKHH2 (Pleckstrin homology domain-containing family H member 2 OS=Homo sapiens GN=PLEKHH2 PE=1 SV=2)

HSP 1 Score: 565.844 bits (1457), Expect = 3.267e-178
Identity = 308/811 (37.98%), Postives = 472/811 (58.20%), Query Frame = 0

Query:  422 RTCAPFTAQNMRSETLEKAGWLVKLGGRIKNWKRRWFVLSEGKLSYYKSRGGMYGKPVGWIVIKQITQLSRSERPLTMEITTPNRTYYLTADNKEEVTDWLRVLRNALKRFTGARLLSRVGE-KTIFSGWFTKAKCGSSKHCWAVLKEKSLLFFKTDIEQAPVGAMSLREIISVTTVEDEAPNEQESDGSCKLMVQCL-------KDSHPTYFVVASRSEMELWLHHLQRMCSGTDANNETDFEAIVSKLMKLDGDTGSRYWRSKIMVHSKQALKESLSSLPTSELETEAVNLWKSIQLFSTTPVNETAIDYHIALAQDVLQNCLNHAELQTEIYCQLIKQTSKYRGQPQPEGSTAYLNDWTSANMDEGGYGTIDLNPVSSFVYLQCWQLLALCTSIFLPKLKILWLLKAHLHRNASESSDVGRYAIYCQRSLERTLKNGERETKPSRMEAIALIARNPFYRIYPMSIPVYFVNNSYQVFSFDGSTTISEFNTNINEELGLRNNNESGFALYSDNPVAQ-TEHCMQGDLKLCDVISKWEQACQKLKTGRFERSKAIKLTYKNRLFFKSSAGLQTDKEKYFTVFQVNEALRMGHMLPAPPVLS-KLTAYFSQIAFGDYVEHF--------------KLLEDIMQKIYPA-YLKLEQASIRRKVFKSVADDWSALKGKSIKECVHGYLHLAQAIPLYGSKLFKAQEKLVGNADSKEPPTTIWIAIDEERLQILSKD-LEPRKSYEWSNVVTFGGFKEDFMMVVQDVLSPGDAASPGETTDVTNRHLFAMPPGRVLEVTLLIASYINAVVQKQG 1206
            +TC+  ++ N ++E LEK+G+L+K+ G++K+WKRRWFVL  G+L YYKS   +  KP G I +     + R +   T+++TT   TYYLTAD+   + +W++VL+N L R   A  LS   E K    G  TK K G SK  W  L  K+L +F++  ++ P+G + L E   V  V+    ++++ + S + ++          KD  PTY ++ S+ E + WL+HL       + N  ++FE +V KL+ +DG+  S+ WR   + HSK+ +   L++LP+  L+TEA+ L+K+ QLF    V+  AIDYHI+LAQ  LQ CL H ELQ EI CQLIKQT + + Q QP                          P      LQ WQLLALC  +FLP    LWLL+ HL RNA   ++ G+YAIYCQR +ERT +NG+RE +PSRME ++ + RNP++   P SIPV+F+N  YQV  FD STT+ EF   +N++ G+R   +SGFAL++D+P  +  EHC+QG++K+CD+ISKWEQA ++ + G+ E ++ ++LTYKNRL+F   A  +TD+EK   ++Q N+ +  G + P    L+ ++ A  SQ+  GD+   F              + L+ +++K YP  Y         R++ + ++  W AL+G S  +CV  YL +A+  P +G+KLF A+     +  S    T +W+A+ E+ L +L  + +    SY + +++TFGG+++DFM+V+ +  S             T + LFAM   ++LE+TLLIASYIN   Q++ 
Sbjct:  690 KTCSS-SSDNGKNEPLEKSGYLLKMSGKVKSWKRRWFVLKGGELLYYKSPSDVIRKPQGHIELSASCSILRGDNKQTVQLTTEKHTYYLTADSPNILEEWIKVLQNVL-RVQAANPLSLQPEGKPTMKGLLTKVKHGYSKRVWCTLIGKTLYYFRSQEDKFPLGQIKLWEA-KVEEVDRSCDSDEDYEASGRSLLSTHYTIVIHPKDQGPTYLLIGSKHEKDTWLYHLTVAAGSNNVNVGSEFEQLVCKLLNIDGEPSSQIWRHPTLCHSKEGIISPLTTLPSEALQTEAIKLFKTCQLFINAAVDSPAIDYHISLAQSALQICLTHPELQNEICCQLIKQTRRRQPQNQP-------------------------GP------LQGWQLLALCVGLFLPHHPFLWLLRLHLKRNADSRTEFGKYAIYCQRCVERTQQNGDREARPSRMEILSTLLRNPYHHSLPFSIPVHFMNGIYQVVGFDASTTVEEFLNTLNQDTGMRKPAQSGFALFTDDPSGRDLEHCLQGNIKICDIISKWEQASKEQQPGKCEGTRTVRLTYKNRLYFSVQARGETDREKLLLMYQTNDQIING-LFPLNKDLALEMAALLSQVEIGDFERPFSTPAGHVTNQCKVNQTLKQVIEKFYPKRYRDGCSEEQLRQLCQRLSTRWMALRGHSAADCVRIYLTVARKWPFFGAKLFLAKPITPSSLGS----TFLWLAVHEDGLSLLEYNSMRLIVSYVYKSLMTFGGYQDDFMVVINNTHSKDKP---------TEKLLFAMAKPKILEITLLIASYINNFHQQKA 1452

The following BLAST results are available for this feature:

BLAST of TCONS_00015660-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00015660-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PKHH2	3.267e-178	37.98	Pleckstrin homology domain-containing family H mem...	[more]

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TCONS_00015660-protein (polypeptide) - C. hemisphaerica