TCONS_00015366-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015366-protein
Unique NameTCONS_00015366-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length214

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015366-protein ID=TCONS_00015366-protein|Name=TCONS_00015366-protein|organism=Clytia hemisphaerica|type=polypeptide|length=214bp
MEAVALHDFNVTSNEDELPFLKGSILKVLNMTDDRNWYKAEQNGKEGFVP
KNYIQMKPHVWYYGKIKRAEAEQLLLQEPHDGAFLLRDSESTAGDFSLSV
KFNDQCQHFKVLRDGAGKYFLWVVKFNSLNQLVEYHRAASVSRSQTIYLK
DMVNAHEVGRALFDFIAQEDGELGFNRGDLIKVTDTSDQHWWSGIFNDRS
GMFPANYIQLIVTC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008589XLOC_008589Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015366TCONS_00015366Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR000980SH2
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452SH3 domainPRINTSPR00452SH3DOMAINcoord: 16..31
score: 37.43
coord: 188..197
score: 29.11
coord: 199..211
score: 37.86
coord: 1..9
score: 32.47
IPR001452SH3 domainSMARTSM00326SH3_2coord: 157..212
e-value: 1.9E-18
score: 77.3
coord: 1..58
e-value: 4.0E-14
score: 62.9
IPR001452SH3 domainPFAMPF00018SH3_1coord: 160..205
e-value: 1.8E-13
score: 49.7
coord: 4..51
e-value: 1.2E-12
score: 47.1
IPR001452SH3 domainPROSITEPS50002SH3coord: 154..213
score: 15.808
IPR001452SH3 domainPROSITEPS50002SH3coord: 1..59
score: 16.25
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 157..211
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 3..42
IPR000980SH2 domainPRINTSPR00401SH2DOMAINcoord: 61..75
score: 52.84
coord: 125..139
score: 36.05
coord: 93..104
score: 41.67
coord: 81..91
score: 56.12
coord: 105..115
score: 17.79
IPR000980SH2 domainSMARTSM00252SH2_5coord: 59..142
e-value: 1.7E-33
score: 127.3
IPR000980SH2 domainPFAMPF00017SH2coord: 61..136
e-value: 3.2E-25
score: 87.9
IPR000980SH2 domainGENE3D3.30.505.10coord: 62..157
e-value: 1.2E-29
score: 102.1
IPR000980SH2 domainPROSITEPS50001SH2coord: 61..153
score: 22.357
IPR000980SH2 domainSUPERFAMILY55550SH2 domaincoord: 30..140
NoneNo IPR availableGENE3D2.30.30.40coord: 158..213
e-value: 2.6E-19
score: 68.1
NoneNo IPR availableGENE3D2.30.30.40coord: 1..61
e-value: 5.1E-18
score: 64.1
NoneNo IPR availableCDDcd11804SH3_GRB2_like_Ncoord: 2..54
e-value: 2.93299E-28
score: 101.279
NoneNo IPR availableCDDcd09941SH2_Grb2_likecoord: 57..151
e-value: 5.7657E-53
score: 166.676

Blast
[Close]
BLAST of TCONS_00015366-protein vs. Swiss-Prot (Human)
Match: GRB2 (Growth factor receptor-bound protein 2 OS=Homo sapiens GN=GRB2 PE=1 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 5.845e-97
Identity = 134/214 (62.62%), Postives = 168/214 (78.50%), Query Frame = 0 
Query:    1 MEAVALHDFNVTSNEDELPFLKGSILKVLNMTDDRNWYKAEQNGKEGFVPKNYIQMKPHVWYYGKIKRAEAEQLLLQEPHDGAFLLRDSESTAGDFSLSVKFNDQCQHFKVLRDGAGKYFLWVVKFNSLNQLVEYHRAASVSRSQTIYLKDMVNAHEVG---RALFDFIAQEDGELGFNRGDLIKVTDTSDQHWWSGIFNDRSGMFPANYIQLI 211
            MEA+A +DF  T+ +DEL F +G ILKVLN   D+NWYKAE NGK+GF+PKNYI+MKPH W++GKI RA+AE++L ++ HDGAFL+R+SES  GDFSLSVKF +  QHFKVLRDGAGKYFLWVVKFNSLN+LV+YHR+ SVSR+Q I+L+D+    +     +ALFDF  QEDGELGF RGD I V D SD +WW G  + ++GMFP NY+  +
Sbjct:    1 MEAIAKYDFKATA-DDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPV 213
The following BLAST results are available for this feature:
BLAST of TCONS_00015366-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GRB25.845e-9762.62Growth factor receptor-bound protein 2 OS=Homo sap... [more]
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