TCONS_00015308-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015308-protein
Unique NameTCONS_00015308-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length302

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015308-protein ID=TCONS_00015308-protein|Name=TCONS_00015308-protein|organism=Clytia hemisphaerica|type=polypeptide|length=302bp
MAAFFKYICRFENCQKKFNTLFDLINHIEYSHISRDPILLKQQELSQPPA
VALSYVNCFFSDQFKNTPLDTDAELPSNFTVKKLGRSKIFDRSTKLNDSL
ESMLDESDTYSDAGSDDSCHSWSTSASTNAFHNPHNENTIPSSSNTFTNV
TASITTESLQGKFTCLEDSEGKKRFLCTVPGCTKKYKNINGIKYHVKNGH
NKKETLTGEVKKNYLCHCGKAYKSQSGLRHHQNTQHNANGGNNVGSTSNS
STTTTPVKNSFTSTFEGKKLDHNFRSQNNQSLPPVAEMCQAPNTALVPEL
AI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008558XLOC_008558Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015308TCONS_00015308Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 7..32
e-value: 0.013
score: 24.6
coord: 175..200
e-value: 0.79
score: 18.7
coord: 214..236
e-value: 49.0
score: 7.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 9..32
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 177..200
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 7..37
score: 10.533
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 7..36
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 217..236
e-value: 0.012
score: 16.0
NoneNo IPR availableGENE3D3.30.160.60coord: 6..35
e-value: 2.6E-4
score: 20.5
coord: 174..209
e-value: 0.32
score: 10.6
NoneNo IPR availableGENE3D2.10.69.10coord: 210..254
e-value: 0.014
score: 15.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..258

Blast
[Close]
BLAST of TCONS_00015308-protein vs. Swiss-Prot (Human)
Match: JAZF1 (Juxtaposed with another zinc finger protein 1 OS=Homo sapiens GN=JAZF1 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.455e-37
Identity = 82/230 (35.65%), Postives = 118/230 (51.30%), Query Frame = 0 
Query:    2 AAFFKYICRFENCQKKFNTLFDLINHIEYSHISRDPILLKQQELSQPPAVALSYVNCFFSDQFKNTPLDTDAELPSNFTVKKLGRSKIFDRSTKLNDSLESMLDESDTYSDAGSDDSCHSWSTSASTNAFHNPHNENTIPSSSNTFTNVTASITTESLQGKFTCLEDSEGKKRFLCTVPGCTKKYKNINGIKYHVKNGHNKKETLTGEVKKNYLCHCGKAYKSQSGLRHH 231
            A+FF   CRF  C   F TL DLI HIE +HI  DP +L++QEL QP  VALSY+N F +D  +        ++    ++         + ST    S  S+           S     S+ +S  T + ++    +   S S+      ++I++E++     C+   E +K F C VPGC K+YKN+NGIKYH KNGH  +      V+K + C CGK+YK+  GLRHH
Sbjct:    7 ASFFSNTCRFGGCGLHFPTLADLIEHIEDNHIDTDPRVLEKQELQQPTYVALSYINRFMTDAARREQESLKKKIQPKLSLTLSSSVSRGNVSTPPRHSSGSLTPPVTPPITPSS-----SFRSSTPTGSEYDEEEVDYEESDSDESWTTESAISSEAILSSM-CMNGGE-EKPFACPVPGCKKRYKNVNGIKYHAKNGHRTQI----RVRKPFKCRCGKSYKTAQGLRHH 225
The following BLAST results are available for this feature:
BLAST of TCONS_00015308-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
JAZF12.455e-3735.65Juxtaposed with another zinc finger protein 1 OS=H... [more]
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