|
Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00015294-protein ID=TCONS_00015294-protein|Name=TCONS_00015294-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1366bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00015294-protein vs. Swiss-Prot (Human)
Match: MALR1 (MAM and LDL-receptor class A domain-containing protein 1 OS=Homo sapiens GN=MALRD1 PE=1 SV=4) HSP 1 Score: 106.686 bits (265), Expect = 5.566e-23 Identity = 105/407 (25.80%), Postives = 160/407 (39.31%), Query Frame = 0
Query: 28 FQCDYETTTCG------ASYDWIKRTGSTPTPNTGPSTDAT-GIASRSYLYHE-----ANIRPVGVVFYLIPIDSINGFCVEFYYHMYGVGMGKLNV--ELMNQQGIKKVLQLSGNQGNIWHKFNRTFIHTSGNVMLKFTAERGSSLESDIAIDEIKVASSCSVKTTQQTTTPSPTDSSQTTKATIQTTKRPFETTKSPHETTGTHTTTPSTSSSV--IFKCDFERDACNSSITSS---------------------------KNWLRW------SGRTPSSNTGPSTDATGSSLR-YYLYYETSGGLFGSQA-LLHYRLSANSLSYCVEFSYHMYGSDMGRFEVYFTPESGLPRQLLTVSGNQGDQWRKARLTALNSNFPRASYVTLAFVATRGTSYMSDIAIDEI 383
QC++ET C +DW + G TPT NTGP D T G A YLY E A ++ ++ G FYYHM+G + +L + + + + + Q+ GNQGN W + I + + A G DIAID++ P+P ++S T PH T S + + KCDF+ D + S +S N RW S N PS D T ++ +YLY ++S G FG A +L +S + F HM G+ +G +V ++ + +L +G QG QW++A + S+ + F A RG SY+ D+A+D+I
Sbjct: 863 LQCNFETGICNWEQDAKDDFDWTRSQGPTPTLNTGPMKDNTLGTAKGHYLYIESSEPQAFQDSAALLSPILNATDTKGCTFRFYYHMFGKRIYRLAIYQRIWSDSRGQLLWQIFGNQGNRWIR-KHLNISSRQPFQILVEASVGDGFTGDIAIDDLSFMDCTLYPGNLPADLPTPPETS-------------VPVTLPPHNCTDNEFICRSDGHCIEKMQKCDFKYDCPDKSDEASCVMEVCSFEKRSLCKWYQPIPVHLLQDSNTFRWGLGNGISIHHGEENHRPSVDHTQNTTDGWYLYADSSNGKFGDTADILTPIISLTGPKCTLVFWTHMNGATVGSLQVLIKKDN-VTSKLWAQTGQQGAQWKRAEVF-----LGIRSHTQIVFRAKRGISYIGDVAVDDI 1249 HSP 2 Score: 90.5077 bits (223), Expect = 5.758e-18 Identity = 95/381 (24.93%), Postives = 154/381 (40.42%), Query Frame = 0
Query: 27 FFQCDYETTTC-------GASYDWIKRTGSTPTPN---TGPSTDATGIASRSY----LYHEANIRPVGVVFYLIPIDSINGFCVEFYYHMYG--VGMGKLNVELMNQQGIKKVLQLSGNQGNIWHKFNRTFIHTSGNVMLKFTAERGSSLESDIAIDEIKVASSCSVKTTQQTTTPSPTDSSQTTKAT-IQTTKRPFETTKSPHETTGTHTTTPSTSSSVIFKCDFERDACN--SSITSSKNWLRWSGRTPSSNTGPSTDAT-GSSLRYYLYYETS--GGLFGSQALLHYRLSANSLSYCV-EFSYHMYGSDMGRFEVYFTPESGLPRQLL-TVSGNQGDQWRKARLTALNSNFPRASYVTLAFVATRGTSYMSDIAIDEI 383
F +CD+E +C G +DWI+ + S + + P D + AS+ + L +++ V + + G + F+++ YG VG +L + + N + ++ NQG W + S L + AID+I+ + T P P +S + + T+ E + T + + +C+FE CN +W R G TP+ NTGP D T G++ +YLY E+S S ALL L+A C F YHM+G + R +Y S QLL + GNQG++W + L N + A+ G + DIAID++
Sbjct: 651 FSKCDFEANSCDWFEAISGDHFDWIRSSQSELSADFEHQAPPRDHSLNASQGHFMFILKKSSSLWQVAKLQSPTFSQTGPGCILSFWFYNYGLSVGAAELQLHMENSHDSTVIWRVLYNQGKQWLEATIQLGRLSQPFHLSLDKVSLGIYDGVSAIDDIRF---------ENCTLPLPAESCEGLDHFWCRHTRACIEKLRLCDLVDDCGDRTDEVNCAPELQCNFETGICNWEQDAKDDFDWTRSQGPTPTLNTGPMKDNTLGTAKGHYLYIESSEPQAFQDSAALLSPILNATDTKGCTFRFYYHMFGKRIYRLAIYQRIWSDSRGQLLWQIFGNQGNRWIRKHL-----NISSRQPFQILVEASVGDGFTGDIAIDDL 1017 HSP 3 Score: 88.9669 bits (219), Expect = 1.558e-17 Identity = 92/349 (26.36%), Postives = 151/349 (43.27%), Query Frame = 0
Query: 54 NTGPSTDATGIASRS-YLYHEANIRPVG-VVFYLIPIDSING--FCVEFYYHMYGVGMGKLNVELMNQQGIKKVLQLSGNQGNIWHKFNRTFIHTSGNVMLKFTAERGSSLESDIAIDEIKVASSCSVKTTQQTTTPSPTDSSQTTKATIQTTKRPFETTKSPHETTGTHTTTPSTSSSVIFKCDFERDACNSSITSSKN--WLRWSGRTPSSNTGPSTDAT-GSSLRYYLYYETSGGLFGSQALLHYRLSANSLSY----C-VEFSYHMYGSDMGRFEVYFTPESGLPRQLLTVSGNQGDQWRKARLTALNSNFPRASYVTLAFVATRGTSYMSDIAIDEIVVRTDRC 390
N PS D T + YLY +++ G L PI S+ G + F+ HM G +G L V + K+ +G QG W K F+ + + F A+RG S D+A+D+I + + ++ T + K I K + + + T TSS +CDFE D C+ ++ W + P++ T P+ D T G+S +Y++ ++ LF Q + R+S+ +S C + F YHMYG+ +G + + + LL ++ QG+ WR+ L+ L F G DIA+D+IV+ T+ C
Sbjct: 1131 NHRPSVDHTQNTTDGWYLYADSSNGKFGDTADILTPIISLTGPKCTLVFWTHMNGATVGSLQVLIKKDNVTSKLWAQTGQQGAQW-KRAEVFLGIRSHTQIVFRAKRGISYIGDVAVDDISFQDCSPLLSPERKCTDH--EFMCANKHCIAKDKL-CDFVNDCADNSDETTFICRTSSG---RCDFEFDLCSWKQEKDEDFDWNLKASSIPAAGTEPAADHTLGNSSGHYIFIKS---LFPQQPMRAARISSPVISKRSKNCKIIFHYHMYGNGIGALTLMQVSVTNQTKVLLNLTVEQGNFWRREELSLFGDE-----DFQLKFEGRVGKGQRGDIALDDIVL-TENC 1463 The following BLAST results are available for this feature:
BLAST of TCONS_00015294-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
|
