TCONS_00015294-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015294-protein
Unique NameTCONS_00015294-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1366

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015294-protein ID=TCONS_00015294-protein|Name=TCONS_00015294-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1366bp
MELYSVLILLVAGSASYTNGIEPRKIFFQCDYETTTCGASYDWIKRTGST
PTPNTGPSTDATGIASRSYLYHEANIRPVGVVFYLIPIDSINGFCVEFYY
HMYGVGMGKLNVELMNQQGIKKVLQLSGNQGNIWHKFNRTFIHTSGNVML
KFTAERGSSLESDIAIDEIKVASSCSVKTTQQTTTPSPTDSSQTTKATIQ
TTKRPFETTKSPHETTGTHTTTPSTSSSVIFKCDFERDACNSSITSSKNW
LRWSGRTPSSNTGPSTDATGSSLRYYLYYETSGGLFGSQALLHYRLSANS
LSYCVEFSYHMYGSDMGRFEVYFTPESGLPRQLLTVSGNQGDQWRKARLT
ALNSNFPRASYVTLAFVATRGTSYMSDIAIDEIVVRTDRCTGPMAGLHFS
RTPAPTQNMFTSHFSHSTEYGFVSIELKEPQTSVLSVINIDIRSQTNHGS
YFSSLVAFTRMPSFLISQNMYILEGTPTTNIFQYGNLTIGNVISGTKCAT
HQFEKPFSSKPVVKITAGVFHSQRLPSQELVNAWLKSVSVTNFTVCTKEM
IDFSGSRDVIINFVAASQTSDLLKEIHHIKIPKGDIQPNTTCIEKQLSNI
FIDPPYVFTSVESPSEPAISWTKGISQSKVEICIAMSHATDTEIHLIVDG
NISPCTNVSCPDHLECQVNKTNAKAFCGCIQRCDVHQEFCGSDRQTYDSF
CRMNQLHCWRNGAESKSNVTIQHYGKCQVPTIQSGRTQLEANKEMPGLFC
KYINIDPTNFINSQSSTLKVLLTSSLNQTSNNMKEASAAWSEDVTINGFK
ACIMVAGRHLHSEFDYPPSVHWTVFQKEYSPGKYSGSVMLDTWYTGTQCK
EAMTINYLTDSIGEGNVFASAHHLEARNLQNAMTVWAEKTRRSSNYVSIR
VCARELQNFDGVHKGVVIHWLYVPRKPLMPPHTSEHLYAEFPAMTITLGQ
ENPVDCQNFTYNTRFPSLPNPAVIIGAVNTNIPYSYVYTASVYSQHDVAV
WIEKIDRAKLTICLKSLRSSISRPLLKIGILVFPNLCPNGGSFRNGTCYH
SMPNCASFSAAKAECQNKFGASLPIINNALQSTSVEERITGPSWLDLTKS
STGVWKWGDSTSLGFTKWYPGQPGSIPGHNCAVVNNTDGKNGWKVEDCTE
CKNVVCQKDADLVERSCDSFCSNGGTCSFTNGRLSCNCTERFYGVRCENS
LEEVEGCSNYTMHNESWRNVHHNSTIQSNETSCDARFLTTGWHRFGGEAG
TQLYNGCPAPGSCGTRSPGYLSHDVSIPLGDSRXTQLYNGCPAPGSCGTR
SPGYLSQNVSIPLGDSRPVRIYFRTFYCGDDYGTVVITNCARFYTYKFLP
ISSIPYWSCNYGVCTI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008547XLOC_008547Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015294TCONS_00015294Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000998MAM_dom
IPR001304C-type_lectin-like
IPR016186C-type_lectin-like/link
IPR013032EGF-like_CS
IPR000742EGF-like_dom
IPR016187CTDL_fold
IPR013320ConA-like_dom
IPR002350Kazal_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000998MAM domainSMARTSM00137MAM_2coord: 25..177
e-value: 1.2E-5
score: 16.7
coord: 228..392
e-value: 1.9E-21
score: 87.3
IPR000998MAM domainPFAMPF00629MAMcoord: 30..175
e-value: 6.6E-20
score: 71.5
coord: 233..390
e-value: 5.7E-27
score: 94.4
IPR000998MAM domainPROSITEPS50060MAM_2coord: 231..392
score: 23.709
IPR000998MAM domainPROSITEPS50060MAM_2coord: 28..177
score: 18.646
IPR000998MAM domainCDDcd06263MAMcoord: 30..175
e-value: 3.1875E-21
score: 91.6705
IPR000998MAM domainCDDcd06263MAMcoord: 233..390
e-value: 2.45907E-32
score: 124.027
IPR001304C-type lectin-likeSMARTSM00034CLECT_2coord: 1037..1157
e-value: 1.0E-17
score: 74.8
IPR001304C-type lectin-likePFAMPF00059Lectin_Ccoord: 1057..1158
e-value: 2.0E-9
score: 38.1
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 1044..1157
score: 16.103
NoneNo IPR availableGENE3D2.60.120.200coord: 227..390
e-value: 4.9E-33
score: 114.0
NoneNo IPR availableGENE3D2.60.120.200coord: 25..176
e-value: 7.1E-24
score: 84.1
NoneNo IPR availableGENE3D2.10.25.10coord: 1152..1202
e-value: 1.6E-4
score: 21.0
NoneNo IPR availableGENE3D3.30.60.30coord: 651..728
e-value: 1.1E-9
score: 38.2
NoneNo IPR availableCDDcd00037CLECTcoord: 1048..1158
e-value: 7.49146E-15
score: 72.2673
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 1166..1203
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 873..1151
e-value: 6.3E-23
score: 80.8
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 1186..1197
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 1163..1198
score: 13.766
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 1026..1161
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 28..175
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 231..391
IPR002350Kazal domainSUPERFAMILY100895Kazal-type serine protease inhibitorscoord: 677..727

Blast
BLAST of TCONS_00015294-protein vs. Swiss-Prot (Human)
Match: MALR1 (MAM and LDL-receptor class A domain-containing protein 1 OS=Homo sapiens GN=MALRD1 PE=1 SV=4)

HSP 1 Score: 106.686 bits (265), Expect = 5.566e-23
Identity = 105/407 (25.80%), Postives = 160/407 (39.31%), Query Frame = 0
Query:   28 FQCDYETTTCG------ASYDWIKRTGSTPTPNTGPSTDAT-GIASRSYLYHE-----ANIRPVGVVFYLIPIDSINGFCVEFYYHMYGVGMGKLNV--ELMNQQGIKKVLQLSGNQGNIWHKFNRTFIHTSGNVMLKFTAERGSSLESDIAIDEIKVASSCSVKTTQQTTTPSPTDSSQTTKATIQTTKRPFETTKSPHETTGTHTTTPSTSSSV--IFKCDFERDACNSSITSS---------------------------KNWLRW------SGRTPSSNTGPSTDATGSSLR-YYLYYETSGGLFGSQA-LLHYRLSANSLSYCVEFSYHMYGSDMGRFEVYFTPESGLPRQLLTVSGNQGDQWRKARLTALNSNFPRASYVTLAFVATRGTSYMSDIAIDEI 383
             QC++ET  C         +DW +  G TPT NTGP  D T G A   YLY E     A      ++  ++      G    FYYHM+G  + +L +   + +    + + Q+ GNQGN W +     I +     +   A  G     DIAID++                P+P ++S                T  PH  T       S    +  + KCDF+ D  + S  +S                            N  RW      S      N  PS D T ++   +YLY ++S G FG  A +L   +S       + F  HM G+ +G  +V    ++ +  +L   +G QG QW++A +          S+  + F A RG SY+ D+A+D+I
Sbjct:  863 LQCNFETGICNWEQDAKDDFDWTRSQGPTPTLNTGPMKDNTLGTAKGHYLYIESSEPQAFQDSAALLSPILNATDTKGCTFRFYYHMFGKRIYRLAIYQRIWSDSRGQLLWQIFGNQGNRWIR-KHLNISSRQPFQILVEASVGDGFTGDIAIDDLSFMDCTLYPGNLPADLPTPPETS-------------VPVTLPPHNCTDNEFICRSDGHCIEKMQKCDFKYDCPDKSDEASCVMEVCSFEKRSLCKWYQPIPVHLLQDSNTFRWGLGNGISIHHGEENHRPSVDHTQNTTDGWYLYADSSNGKFGDTADILTPIISLTGPKCTLVFWTHMNGATVGSLQVLIKKDN-VTSKLWAQTGQQGAQWKRAEVF-----LGIRSHTQIVFRAKRGISYIGDVAVDDI 1249          

HSP 2 Score: 90.5077 bits (223), Expect = 5.758e-18
Identity = 95/381 (24.93%), Postives = 154/381 (40.42%), Query Frame = 0
Query:   27 FFQCDYETTTC-------GASYDWIKRTGSTPTPN---TGPSTDATGIASRSY----LYHEANIRPVGVVFYLIPIDSINGFCVEFYYHMYG--VGMGKLNVELMNQQGIKKVLQLSGNQGNIWHKFNRTFIHTSGNVMLKFTAERGSSLESDIAIDEIKVASSCSVKTTQQTTTPSPTDSSQTTKAT-IQTTKRPFETTKSPHETTGTHTTTPSTSSSVIFKCDFERDACN--SSITSSKNWLRWSGRTPSSNTGPSTDAT-GSSLRYYLYYETS--GGLFGSQALLHYRLSANSLSYCV-EFSYHMYGSDMGRFEVYFTPESGLPRQLL-TVSGNQGDQWRKARLTALNSNFPRASYVTLAFVATRGTSYMSDIAIDEI 383
            F +CD+E  +C       G  +DWI+ + S  + +     P  D +  AS+ +    L   +++  V  +       +  G  + F+++ YG  VG  +L + + N      + ++  NQG  W +        S    L          +   AID+I+          +  T P P +S +       + T+   E  +           T   + +   +C+FE   CN         +W R  G TP+ NTGP  D T G++  +YLY E+S       S ALL   L+A     C   F YHM+G  + R  +Y    S    QLL  + GNQG++W +  L     N        +   A+ G  +  DIAID++
Sbjct:  651 FSKCDFEANSCDWFEAISGDHFDWIRSSQSELSADFEHQAPPRDHSLNASQGHFMFILKKSSSLWQVAKLQSPTFSQTGPGCILSFWFYNYGLSVGAAELQLHMENSHDSTVIWRVLYNQGKQWLEATIQLGRLSQPFHLSLDKVSLGIYDGVSAIDDIRF---------ENCTLPLPAESCEGLDHFWCRHTRACIEKLRLCDLVDDCGDRTDEVNCAPELQCNFETGICNWEQDAKDDFDWTRSQGPTPTLNTGPMKDNTLGTAKGHYLYIESSEPQAFQDSAALLSPILNATDTKGCTFRFYYHMFGKRIYRLAIYQRIWSDSRGQLLWQIFGNQGNRWIRKHL-----NISSRQPFQILVEASVGDGFTGDIAIDDL 1017          

HSP 3 Score: 88.9669 bits (219), Expect = 1.558e-17
Identity = 92/349 (26.36%), Postives = 151/349 (43.27%), Query Frame = 0
Query:   54 NTGPSTDATGIASRS-YLYHEANIRPVG-VVFYLIPIDSING--FCVEFYYHMYGVGMGKLNVELMNQQGIKKVLQLSGNQGNIWHKFNRTFIHTSGNVMLKFTAERGSSLESDIAIDEIKVASSCSVKTTQQTTTPSPTDSSQTTKATIQTTKRPFETTKSPHETTGTHTTTPSTSSSVIFKCDFERDACNSSITSSKN--WLRWSGRTPSSNTGPSTDAT-GSSLRYYLYYETSGGLFGSQALLHYRLSANSLSY----C-VEFSYHMYGSDMGRFEVYFTPESGLPRQLLTVSGNQGDQWRKARLTALNSNFPRASYVTLAFVATRGTSYMSDIAIDEIVVRTDRC 390
            N  PS D T   +   YLY +++    G     L PI S+ G    + F+ HM G  +G L V +       K+   +G QG  W K    F+    +  + F A+RG S   D+A+D+I       + + ++  T    +     K  I   K   +      + +   T    TSS    +CDFE D C+      ++  W   +   P++ T P+ D T G+S  +Y++ ++   LF  Q +   R+S+  +S     C + F YHMYG+ +G   +     +   + LL ++  QG+ WR+  L+             L F    G     DIA+D+IV+ T+ C
Sbjct: 1131 NHRPSVDHTQNTTDGWYLYADSSNGKFGDTADILTPIISLTGPKCTLVFWTHMNGATVGSLQVLIKKDNVTSKLWAQTGQQGAQW-KRAEVFLGIRSHTQIVFRAKRGISYIGDVAVDDISFQDCSPLLSPERKCTDH--EFMCANKHCIAKDKL-CDFVNDCADNSDETTFICRTSSG---RCDFEFDLCSWKQEKDEDFDWNLKASSIPAAGTEPAADHTLGNSSGHYIFIKS---LFPQQPMRAARISSPVISKRSKNCKIIFHYHMYGNGIGALTLMQVSVTNQTKVLLNLTVEQGNFWRREELSLFGDE-----DFQLKFEGRVGKGQRGDIALDDIVL-TENC 1463          
The following BLAST results are available for this feature:
BLAST of TCONS_00015294-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MALR15.566e-2325.80MAM and LDL-receptor class A domain-containing pro... [more]
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