TCONS_00015235-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015235-protein
Unique NameTCONS_00015235-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1185

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015235-protein ID=TCONS_00015235-protein|Name=TCONS_00015235-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1185bp
MKSSRLVLISMLFFFHESHQSCQNVHSLQQSNITASMDKAIVFDKNYSNP
QYAAMFGGDKAFCVTPKNDFHIQIDFKKLLTITNIRIQGFILNKKSLMMS
AFSLMFSTDGKKWYTYVSNNDIPFIVTKYKSYTGDTKVNIELDNPVATQY
LRFLPKEPGIEQNNADPICMRIQVTGCERVQPPKIITPSLVEMHLSETKR
LTCQGIGTFGLDVKWTENQMANSFYPKNYKVDHKVKYALSFNMDDLKNEL
TCNVHDLFLNCTREYTCKGNYHFKQDVFAISKTLVSVIVKFPSQPSSFKI
KSKFPGKVVLQWNATNLYQFPAEKLEYGLMCSRTNFTEVTLPLSTNTYIL
DNLDVYTSYTCSIKVQVKNESLAAFPFTFAQKPVVLKFNSSTIRPNVQPE
LKAKVMSPTEINVSFKVDFDRKEYGQIKGYIIKADMTEYANSPSSLRSFE
REEVEITKRIDDPLSREYTLKGVVPWSKYKLTLYVINEDELKTNSVSKII
RMPEGVPSNGLSMAVERKAKTSLLLVNKFEKGLRLQHMNGNILKFMVHVS
PINKTQYFTRGIVEVVGLSPNTEYVIRGKAATKVGYGPFGPALVVRTLED
RPTAPLHIDTFVIKNKKLGVTWNAPKHSNGNITAYMIKVELKNGTVLDFI
TPKNPHYYFEFDMDKSIVTKITVAAETSAGWGPDSKPYYPQDDPEDPESK
SLNQVILIVALVFAIIFLIILIVLCALLNRRRSMTICVKPDTARQPIYPQ
DDSLPSPRLPEDDEEEYEQFVMWSRQRSDSVGTGSHISLLNSTHEPVPVD
KFYQYMESLKEDEYGALMDEFKSVTSGKCSPWLCAERPENQNKNRYTNIN
AYDHSRVVLKTESRRKGQDYINASFVQGFNYEESSGPPYRYISAQGPLDY
TKNDFWLMLWQEEATIIVMLTNLVENERLKCSQYWPNDSQHYGDLTVTLD
KIDKTADYITRSFKIEKASTKETRNILQFHFVSWPDHGVPDYPTAILSLR
RRVRHYYDPTKPMIVHCSAGVGRSGCFILLDAMLERIDKEKSVDVFNYLR
YMRTRRVNMVQTFEQYRFAHTAILESITFGNTEIFVGELDKKIRQLGKNN
GMADEFNLLMQNTTPVPATGNLYQVLLREGKFIDAYHVDGYKHRDAFIIT
KATTENNVADFWKMVLEKQCHTIVMLNKSVEQTQV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008517XLOC_008517Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015235TCONS_00015235Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000242PTPase_domain
IPR003595Tyr_Pase_cat
IPR003961FN3_dom
IPR029021Prot-tyrosine_phosphatase-like
IPR013783Ig-like_fold
IPR008979Galactose-bd-like
IPR000421FA58C
IPR016130Tyr_Pase_AS
IPR000387TYR_PHOSPHATASE_dom
Vocabulary: Biological Process
TermDefinition
GO:0006470protein dephosphorylation
GO:0016311dephosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0004725protein tyrosine phosphatase activity
GO:0005515protein binding
GO:0016791phosphatase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016311 dephosphorylation
biological_process GO:0006470 protein dephosphorylation
molecular_function GO:0016791 phosphatase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004725 protein tyrosine phosphatase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000242PTP type protein phosphatasePRINTSPR00700PRTYPHPHTASEcoord: 1012..1030
score: 65.14
coord: 1059..1069
score: 59.95
coord: 974..991
score: 50.82
coord: 869..876
score: 67.87
coord: 891..911
score: 54.2
coord: 1043..1058
score: 30.7
IPR000242PTP type protein phosphataseSMARTSM00194PTPc_3coord: 816..1078
e-value: 1.3E-116
score: 403.3
IPR000242PTP type protein phosphatasePFAMPF00102Y_phosphatasecoord: 1130..1183
e-value: 1.8E-12
score: 47.3
coord: 840..1075
e-value: 3.1E-77
score: 259.2
IPR000242PTP type protein phosphatasePROSITEPS50055TYR_PHOSPHATASE_PTPcoord: 1132..1185
score: 10.372
IPR000242PTP type protein phosphatasePROSITEPS50055TYR_PHOSPHATASE_PTPcoord: 817..1076
score: 54.282
IPR003595Protein-tyrosine phosphatase, catalyticSMARTSM00404ptp_7coord: 975..1075
e-value: 6.1E-41
score: 152.0
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 395..493
e-value: 2.5
score: 16.7
coord: 602..682
e-value: 26.0
score: 7.9
coord: 292..371
e-value: 0.36
score: 19.9
coord: 527..587
e-value: 27.0
score: 7.7
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 395..505
score: 7.235
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 604..696
score: 11.432
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 294..383
score: 8.947
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 506..600
score: 8.426
IPR003961Fibronectin type IIICDDcd00063FN3coord: 539..597
e-value: 0.00550558
score: 35.5499
IPR003961Fibronectin type IIICDDcd00063FN3coord: 602..687
e-value: 8.71014E-4
score: 37.8611
IPR003961Fibronectin type IIICDDcd00063FN3coord: 292..370
e-value: 0.00411049
score: 35.9351
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 285..363
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 537..692
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 395..521
IPR029021Protein-tyrosine phosphatase-likeGENE3D3.90.190.10coord: 789..1083
e-value: 5.2E-104
score: 347.0
IPR029021Protein-tyrosine phosphatase-likeGENE3D3.90.190.10coord: 1110..1185
e-value: 3.0E-14
score: 52.4
IPR029021Protein-tyrosine phosphatase-likeSUPERFAMILY52799(Phosphotyrosine protein) phosphatases IIcoord: 792..1079
IPR029021Protein-tyrosine phosphatase-likeSUPERFAMILY52799(Phosphotyrosine protein) phosphatases IIcoord: 1096..1183
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 546..602
e-value: 4.4E-7
score: 29.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 603..701
e-value: 3.4E-10
score: 39.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 180..281
e-value: 0.0027
score: 17.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 288..442
e-value: 1.6E-8
score: 34.0
coord: 443..545
e-value: 0.022
score: 14.0
IPR008979Galactose-binding domain-likeGENE3D2.60.120.260coord: 19..179
e-value: 2.0E-18
score: 66.2
IPR008979Galactose-binding domain-likeSUPERFAMILY49785Galactose-binding domain-likecoord: 60..178
IPR000421Coagulation factor 5/8 C-terminal domainPFAMPF00754F5_F8_type_Ccoord: 34..172
e-value: 1.0E-13
score: 51.4
IPR000421Coagulation factor 5/8 C-terminal domainPROSITEPS50022FA58C_3coord: 22..177
score: 14.837
IPR016130Protein-tyrosine phosphatase, active sitePROSITEPS00383TYR_PHOSPHATASE_1coord: 1015..1025
IPR000387Tyrosine specific protein phosphatases domainPROSITEPS50056TYR_PHOSPHATASE_2coord: 997..1067
score: 20.167
NoneNo IPR availableCDDcd00047PTPccoord: 843..1075
e-value: 7.05763E-105
score: 330.702

Blast
[Close]
BLAST of TCONS_00015235-protein vs. Swiss-Prot (Human)
Match: PTPRS (Receptor-type tyrosine-protein phosphatase S OS=Homo sapiens GN=PTPRS PE=1 SV=3)

HSP 1 Score: 314.694 bits (805), Expect = 3.176e-88
Identity = 196/553 (35.44%), Postives = 287/553 (51.90%), Query Frame = 0 
Query:  668 VTKITVAAETSAGWGPDSKPYYPQDDPEDPES--KSLNQVILIVALVFAIIFLIILIVLCALLNRRRSMTICVKPDTARQPIYPQDDSLP-----SPRLPEDDEEEYEQFVMW--SRQRSDSVGTGSHISLLNSTHEPVPVDKFYQYMESLKEDEYGALMDEFKSVTSGKCSPWLCAERPENQNKNRYTNINAYDHSRVVLKTESRRKGQDYINASFVQGFNYEESSGPPYRYISAQGPLDYTKNDFWLMLWQEEATIIVMLTNLVENERLKCSQYWPN-DSQHYGDLTVTLDKIDKTADYITRSFKIEKASTKETRNILQFHFVSWPDHGVPDYPTAILSLRRRVRHYYDP-TKPMIVHCSAGVGRSGCFILLDAMLERIDKEKSVDVFNYLRYMRTRRVNMVQTFEQYRFAHTAILESITFGNTEIFVGELDKKIRQLGK------NNGMADEFNLL-----------------------MQNTTPVPATGNLYQVL--LREGKFIDAYHVDGYKHRDAFIITKATTENNVADFWKMVLEKQCHTIVMLNK 1178
            V  +   +E +    P S P+  Q D  DP+        +I ++  V A++F II IV+  LL +        KPD+ R+   P+   L      +P  P+D  E          S  RS     G H   + S H P+P+    ++ E LK ++   L  E++S+  G+   W  +    N+ KNRY N+ AYDHSRV+L+      G DYINA++V G+  + +      YI+ QGPL  T  DFW M+W++ +  IVM+T L E  R+KC QYWPN  ++ YG + VTL    + A +  R+F + K  + E R + QF F +WPDHGVP+YPT  L+  RRV+    P   P++VHCSAGVGR+GCFI++DAMLERI  EK+VDV+ ++  MR++R  MVQT +QY F H A+LE++  GNTE+    L   I++L +        GM  EF  L                       + N  P  +T    Q +  +    +I+A  +DGY+ + A+I T+        DFW+M+ E     +VML K
Sbjct: 1246 VLAVLQKSEPTFAASPFSDPF--QLDNPDPQPIVDGEEGLIWVIGPVLAVVF-IICIVIAILLYKN-------KPDSKRKDSEPRTKCLLNNADLAPHHPKDPVEMRRINFQTPDSGLRSPLREPGFHFESMLS-HPPIPIADMAEHTERLKANDSLKLSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVILQPIEGIMGSDYINANYVDGYRCQNA------YIATQGPLPETFGDFWRMVWEQRSATIVMMTRLEEKSRIKCDQYWPNRGTETYGFIQVTLLDTIELATFCVRTFSLHKNGSSEKREVRQFQFTAWPDHGVPEYPTPFLAFLRRVKTCNPPDAGPIVVHCSAGVGRTGCFIVIDAMLERIKPEKTVDVYGHVTLMRSQRNYMVQTEDQYSFIHEALLEAVGCGNTEVPARSLYAYIQKLAQVEPGEHVTGMELEFKRLANSKAHTSRFISANLPCNKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWENNSTIVVMLTK 1781

HSP 2 Score: 201.83 bits (512), Expect = 2.350e-52
Identity = 121/334 (36.23%), Postives = 172/334 (51.50%), Query Frame = 0 
Query:  760 PEDDEEEYEQFVMWSRQRSDSVGTGSHISLLNST--------HEPVPVDKFYQYMESLKEDEYG----ALMDEFKSVTSGKC--SPWLCAERPENQNKNRYTNINAYDHSRVVLKTESRRKGQDYINASFVQGFNYEESSGPPYRYISAQGPLDYTKNDFWLMLWQEEATIIVMLTNLVENERLKCSQYWPND-SQHYGDLTVTLDKIDKTADYITRSFKIEKASTKETRNILQFHFVSWPDHGVPDYPTAILSLRRRV---RHYYDPTKPMIVHCSAGVGRSGCFILLDAMLERIDKEKSVDVFNYLRYMRTRRVNMVQTFEQYRFAHTAILE 1075
            PE   + Y    +   QR+  V T    S ++          +  VP    Y Y++ L + E G     +  EFK + + K   S ++ A  P N+ KNR  NI  Y+ +RV L+     +G DYINASF+ G+  +++      YI+ QGPL  T  DFW MLW+  +TI+VMLT L E  R KC QYWP + S  Y    V          YI R FK+  A   ++R + QF F  WP+ GVP      +    +V   +  +    P+ VHCSAGVGR+G FI L  +LER+  E  VD+F  ++ +RT+R  MVQT ++Y+F + A LE
Sbjct: 1611 PEKTVDVYGHVTLMRSQRNYMVQTEDQYSFIHEALLEAVGCGNTEVPARSLYAYIQKLAQVEPGEHVTGMELEFKRLANSKAHTSRFISANLPCNKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFIDGYRQQKA------YIATQGPLAETTEDFWRMLWENNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDEYQFCYQAALE 1938
The following BLAST results are available for this feature:
BLAST of TCONS_00015235-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTPRS3.176e-8835.44Receptor-type tyrosine-protein phosphatase S OS=Ho... [more]
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