TCONS_00015230-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00015230-protein
Unique Name	TCONS_00015230-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	439

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00015230-protein ID=TCONS_00015230-protein|Name=TCONS_00015230-protein|organism=Clytia hemisphaerica|type=polypeptide|length=439bp
MAALPKPTFSICLFLFQILLLALFAKYAEYGNVEKVSSIYPQFQDVHVMM
FFGFGFLMCFLKKYGFGSITYNFLLSAVVIQWATLMNAWVKQRITKEEGH
STGDPNIVQINILTLMTSDFTAAAVLITMGAVLGKASRLQLFVLAVVECI
FFAISEAVILEFLHISDVGGSIVVHLFGAYFGLAVSAVLQNSGGEHPKES
STKNSDLFSMAGTIFLWMYWPSFNSGTLAGDDAAQSRAVINTYFALASCV
VTTLVFSPIVDKRYRSNMVHIQNATLAGGVAVGTSADLMIQPWGAILIGM
IAAIFSVLGYAYVTPFLSSKLKIHDTCGVHNLHGMPAVLAAIFSAIAAPA
IGEEGKMQYAKTRTGEWSFEKQGGFQIAAAFVALAFAIVGGVITGLIIKQ
LDGIDNEDDLYDDQREFIVPDDDIEANGNVHEMKPTNAS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008515	XLOC_008515	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00015230	TCONS_00015230	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002229	RhesusRHD
IPR024041	NH4_transpt_AmtB-like_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0008519	ammonium transmembrane transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0015696	ammonium transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015696	ammonium transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0008519	ammonium transmembrane transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002229	Blood group Rhesus C/E/D polypeptide	PRINTS	PR00342	RHESUSRHD	coord: 8..26 score: 20.18 coord: 207..225 score: 71.64 coord: 238..260 score: 49.52 coord: 273..286 score: 82.14 coord: 334..350 score: 20.26 coord: 174..189 score: 59.03 coord: 296..314 score: 32.46 coord: 69..86 score: 31.79 coord: 40..57 score: 60.19
None	No IPR available	GENE3D	1.10.3430.10		coord: 25..410 e-value: 1.6E-87 score: 293.5
IPR024041	Ammonium transporter AmtB-like domain	PFAM	PF00909	Ammonium_transp	coord: 11..404 e-value: 1.2E-73 score: 248.1
IPR024041	Ammonium transporter AmtB-like domain	SUPERFAMILY	111352	Ammonium transporter	coord: 42..401

Blast

[Close]

BLAST of TCONS_00015230-protein vs. Swiss-Prot (Human)
Match: RHAG (Ammonium transporter Rh type A OS=Homo sapiens GN=RHAG PE=1 SV=2)

HSP 1 Score: 349.747 bits (896), Expect = 1.263e-117
Identity = 194/430 (45.12%), Postives = 267/430 (62.09%), Query Frame = 0

Query:    7 PTFSICLFLFQILLLALFAKYA------EYGNVEKVS------SIYPQFQDVHVMMFFGFGFLMCFLKKYGFGSITYNFLLSAVVIQWATLMNAWVKQRITKEEGHSTGDPNIVQINILTLMTSDFTAAAVLITMGAVLGKASRLQLFVLAVVECIFFAISEAVILEFLHISDVGGSIVVHLFGAYFGLAVSAVLQNSGGE--HPKESSTKNSDLFSMAGTIFLWMYWPSFNSGTLAGDDAAQSRAVINTYFALASCVVTTLVFSPIVDKRYRSNMVHIQNATLAGGVAVGTSADLMIQPWGAILIGMIAAIFSVLGYAYVTPFLSSKLKIHDTCGVHNLHGMPAVLAAIFSAIAAPAIGEEGKMQYAKTRTGEWSFEKQGGFQIAAAFVALAFAIVGGVITGLIIK-QLDGIDNEDDLYDDQREFIVPD 421
            P  +I L +  I+L  LF +Y       E  N+ K +       +YP FQDVHVM+F GFGFLM FLKKYGF S+  N L++A+ +QW T++     Q I + +G          I I  ++ +DF+AA VLI+ GAVLGK S  Q+ ++ ++E +FFA +E ++ E    SD+G S+ +H FGAYFGLAV+ +L  SG    H  E S   SDLF+M GT+FLWM+WPSFNS      D  Q RA++NTYF+LA+CV+T   FS +V+ R + NMVHIQNATLAGGVAVGT AD+ I P+G+++IG IA + SVLGY ++TP  ++KL+IHDTCGVHNLHG+P V+  + + I A A+G                       Q AA   ++  A+VGG++TGLI+K  L G  ++ + YDD   + VP 
Sbjct:    6 PLMAIVLEIAMIVLFGLFVEYETDQTVLEQLNITKPTDMGIFFELYPLFQDVHVMIFVGFGFLMTFLKKYGFSSVGINLLVAALGLQWGTIV-----QGILQSQGQK------FNIGIKNMINADFSAATVLISFGAVLGKTSPTQMLIMTILEIVFFAHNEYLVSEIFKASDIGASMTIHAFGAYFGLAVAGILYRSGLRKGHENEESAYYSDLFAMIGTLFLWMFWPSFNSAIAEPGDK-QCRAIVNTYFSLAACVLTAFAFSSLVEHRGKLNMVHIQNATLAGGVAVGTCADMAIHPFGSMIIGSIAGMVSVLGYKFLTPLFTTKLRIHDTCGVHNLHGLPGVVGGL-AGIVAVAMGAS---------------NTSMAMQAAALGSSIGTAVVGGLMTGLILKLPLWGQPSDQNCYDDSVYWKVPK 407

The following BLAST results are available for this feature:

BLAST of TCONS_00015230-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00015230-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
RHAG	1.263e-117	45.12	Ammonium transporter Rh type A OS=Homo sapiens GN=...	[more]

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TCONS_00015230-protein (polypeptide) - C. hemisphaerica