TCONS_00015191-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015191-protein
Unique NameTCONS_00015191-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length286

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015191-protein ID=TCONS_00015191-protein|Name=TCONS_00015191-protein|organism=Clytia hemisphaerica|type=polypeptide|length=286bp
MQFDIRRFDIYRKIPKDLTQPTKTGACVSILSIIFIVFLMLSELSSLLFI
DVKSEMFVDISSSQKPVYVRLNVSLPKMACDFVGLDLQDSQGRHEVGFLK
DSKKVPINNGEGCRFEGHFEINRIPGNFHLSTHSAAQQPQNPDMTHIVNS
LQFGDIIETTGAFNAMGELDMTEYPAMATHNYVIKIVPTKFKRLSGQIED
TFQYSYAQKEFIAYNGHRQQLMPAIWFKYDFNPITIQYTEQRQPFYHFIT
MFCAIIGGTFTVAGIIDTIIYTAHNIIKKAEIGKLS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008504XLOC_008504Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015191TCONS_00015191Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012936Erv_C
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012936Endoplasmic reticulum vesicle transporter, C-terminalPFAMPF07970COPIIcoated_ERVcoord: 104..267
e-value: 2.6E-36
score: 125.5
NoneNo IPR availablePFAMPF13850ERGIC_Ncoord: 5..95
e-value: 2.8E-27
score: 94.8

Blast
[Close]
BLAST of TCONS_00015191-protein vs. Swiss-Prot (Human)
Match: ERGI1 (Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Homo sapiens GN=ERGIC1 PE=1 SV=1)

HSP 1 Score: 348.206 bits (892), Expect = 3.379e-121
Identity = 160/290 (55.17%), Postives = 216/290 (74.48%), Query Frame = 0 
Query:    1 MQFDIRRFDIYRKIPKDLTQPTKTGACVSILSIIFIVFLMLSELSSLLFIDVKSEMFVDI--SSSQKPVYVRLNVSLPKMACDFVGLDLQDSQGRHEVGFLKDSKKVPINNGEGCRFEGHFEINRIPGNFHLSTHSAAQQPQNPDMTHIVNSLQFGDIIETT---GAFNAMGELDMTEYPAMATHNYVIKIVPTKFKRLSGQIEDTFQYSYAQKEFIAYNGHRQQLMPAIWFKYDFNPITIQYTEQRQPFYHFITMFCAIIGGTFTVAGIIDTIIYTAHNIIKKAEIGKL 285
            M FD RRFDIYRK+PKDLTQPT TGA +SI   +FI+FL LSEL+  +  +V +E++VD     S   + V LN+SLP + C+ VGLD+QD  GRHEVG + +S K+P+NNG GCRFEG F IN++PGNFH+STHSA  QPQNPDMTH+++ L FGD ++     GAFNA+G  D      +A+H+Y++KIVPT ++  SG+   ++QY+ A KE++AY+ H  +++PAIWF+YD +PIT++YTE+RQP Y FIT  CAIIGGTFTVAGI+D+ I+TA    KK ++GK+
Sbjct:    1 MPFDFRRFDIYRKVPKDLTQPTYTGAIISICCCLFILFLFLSELTGFITTEVVNELYVDDPDKDSGGKIDVSLNISLPNLHCELVGLDIQDEMGRHEVGHIDNSMKIPLNNGAGCRFEGQFSINKVPGNFHVSTHSATAQPQNPDMTHVIHKLSFGDTLQVQNIHGAFNALGGADRLTSNPLASHDYILKIVPTVYEDKSGKQRYSYQYTVANKEYVAYS-HTGRIIPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGILDSCIFTASEAWKKIQLGKM 289
The following BLAST results are available for this feature:
BLAST of TCONS_00015191-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ERGI13.379e-12155.17Endoplasmic reticulum-Golgi intermediate compartme... [more]
back to top