TCONS_00015022-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015022-protein
Unique NameTCONS_00015022-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1040

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015022-protein ID=TCONS_00015022-protein|Name=TCONS_00015022-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1040bp
SPENQQKQNVDQQQQDVDEQCPTKSEDENVENKNYIRQREQNIGHQHKDV
ELQMSLLDNEEEEACEEVGKKGSEVRFLIPKKKRNQKSSSSNNNNDEDDN
EEAEEGGDSNEAEKAGGRGKRKKFDNSVTLRQLFQFSDKLDVLYMVFGSL
GAIFHGLSLPGQLIIFGQLVNNFIDFTQQRELIRKNATAVAPEDVIDIES
EMLFYAQIYAYVAVASWIVGYMQCAFWSISAIRQIQRIRMLFFNSILRQD
VGWFDVNEAGGLTTRMFEDLQQIQSGIGDKVGNTLQAVSTLVGGFGVAFV
FGWKLALVMLAVCPLIVMAGALTGKVMASLTSKEQTAYAQAGAIAEQAIS
SIRTVVAFGGEKEELDSYNAKLVLAEEAGIKKAITGAFSMGVFFIVMAGA
EALAFWYGSTLVADEDFPPGSLLTVFFSILIGSAQIGQAGPNMEALATAK
GAAYYVYQVIKRKSPIDTMNEEGKKPDFYSADQIQFQNIHFHYPSRTDIP
VLQGFDLTVNKGQTVALVGESGCGKSTTIKLLQRFYDVIGGSVIIGKDNI
KDINVKWLRQHIGIVSQEPVLFDMTIADNIRMGKDNATQQEIEQAAINAN
AHDFITNLPKGYDTNVGEGGAQLSGGQKQRIAIARALIKDPQILLLDEAT
SALDTESESIVQTALDNASMGRTTIIIAHRLSTVKNADLIVAVQDGRVAE
KGTHDELMARKGVYYQLVMLQTLAEQEEHELSETGSLITEEEREALLQVR
MMRSLSQMSGEQGASIEDISFARALSVRKSKSDRKKRTKKVKKKSKKEAL
IEEAVDPAPISRVLSYNKPEWHLMGMGLIFSAMHGCIPIFFAFIIGQVLG
ALALPDKEQIKEESKKWSLVFLAMGAANCIGYGMGNYLFGKSGERLTRRL
RSKAFECILKQDIAYFDDPYHGTGQLTARLATDASKVKGATSSRISVLVQ
VSFTALSALFVAFYYSWKLTLLVIAFVPFLVFGGVMRASRFKNFAAKEGK
RLLEASAVSQQALMNIRTVASLGKEDYFYERFSCLLQEPY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008410XLOC_008410Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015022TCONS_00015022Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003439ABC_transporter-like
IPR011527ABC1_TM_dom
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016887 ATPase activity
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 724..744
NoneNo IPR availableGENE3D1.20.1560.10coord: 781..1040
e-value: 5.8E-49
score: 166.1
NoneNo IPR availableGENE3D3.40.50.300coord: 470..727
e-value: 6.0E-79
score: 264.5
NoneNo IPR availableGENE3D1.20.1560.10coord: 125..469
e-value: 2.7E-71
score: 239.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availableCDDcd03249ABC_MTABC3_MDL1_MDL2coord: 484..721
e-value: 1.32665E-147
score: 441.208
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 511..683
e-value: 1.7E-17
score: 74.1
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 502..651
e-value: 8.9E-36
score: 123.3
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 484..720
score: 24.657
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 147..433
e-value: 1.4E-68
score: 231.4
coord: 825..1038
e-value: 1.8E-50
score: 172.1
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 827..1040
score: 36.189
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 146..448
score: 48.701
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 812..1038
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 131..467
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 623..637
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 478..721

Blast
BLAST of TCONS_00015022-protein vs. Swiss-Prot (Human)
Match: MDR1 (Multidrug resistance protein 1 OS=Homo sapiens GN=ABCB1 PE=1 SV=3)

HSP 1 Score: 803.897 bits (2075), Expect = 0.000e+0
Identity = 417/947 (44.03%), Postives = 613/947 (64.73%), Query Frame = 0
Query:  111 EAEKAGGRGKRK--KFDN-----------SVTLRQLFQFSDKLDVLYMVFGSLGAIFHGLSLPGQLIIFGQLVNNFIDFTQQRELIRKNATAVAPEDV---IDIESEMLFYAQIYAYVAVASWIVGYMQCAFWSISAIRQIQRIRMLFFNSILRQDVGWFDVNEAGGLTTRMFEDLQQIQSGIGDKVGNTLQAVSTLVGGFGVAFVFGWKLALVMLAVCPLIVMAGALTGKVMASLTSKEQTAYAQAGAIAEQAISSIRTVVAFGGEKEELDSYNAKLVLAEEAGIKKAITGAFSMGVFFIVMAGAEALAFWYGSTLVADEDFPPGSLLTVFFSILIGSAQIGQAGPNMEALATAKGAAYYVYQVIKRKSPIDTMNEEGKKPDFYSADQIQFQNIHFHYPSRTDIPVLQGFDLTVNKGQTVALVGESGCGKSTTIKLLQRFYDVIGGSVIIGKDNIKDINVKWLRQHIGIVSQEPVLFDMTIADNIRMGKDNATQQEIEQAAINANAHDFITNLPKGYDTNVGEGGAQLSGGQKQRIAIARALIKDPQILLLDEATSALDTESESIVQTALDNASMGRTTIIIAHRLSTVKNADLIVAVQDGRVAEKGTHDELMARKGVYYQLVMLQTLAEQEEHELSETGSLITEEEREALLQVRMMRSLSQMSGEQGASIEDISFARALSVRKSKSDRKKRTKKVKKKSKKEALIEEAVDPAPISRVLSYNKPEWHLMGMGLIFSAMHGCIPIFFAFIIGQVLGALA-LPDKEQIKEESKKWSLVFLAMGAANCIGYGMGNYLFGKSGERLTRRLRSKAFECILKQDIAYFDDPYHGTGQLTARLATDASKVKGATSSRISVLVQVSFTALSALFVAFYYSWKLTLLVIAFVPFLVFGGVMRASRFKNFAAKEGKRLLEASAVSQQALMNIRTVASLGKEDYFYERFSCLLQEPY 1040
            E ++ GG  K+   K +N           +V++  +F++S+ LD LYMV G+L AI HG  LP  +++FG++ + F +     +L+          D    +++E +M  YA  Y+ +     +  Y+Q +FW ++A RQI +IR  FF++I+RQ++GWFDV++ G L TR+ +D+ +I  GIGDK+G   Q+++T   GF V F  GWKL LV+LA+ P++ ++ A+  K+++S T KE  AYA+AGA+AE+ +++IRTV+AFGG+K+EL+ YN  L  A+  GIKKAIT   S+G  F+++  + ALAFWYG+TLV   ++  G +LTVFFS+LIG+  +GQA P++EA A A+GAAY ++++I  K  ID+ ++ G KPD    + ++F+N+HF YPSR ++ +L+G +L V  GQTVALVG SGCGKSTT++L+QR YD   G V +   +I+ INV++LR+ IG+VSQEPVLF  TIA+NIR G++N T  EIE+A   ANA+DFI  LP  +DT VGE GAQLSGGQKQRIAIARAL+++P+ILLLDEATSALDTESE++VQ ALD A  GRTTI+IAHRLSTV+NAD+I    DG + EKG HDELM  KG+Y++LV +QT   + E E +   S   + E +AL          +MS     S    S  R  S R+S    + + +K+   S KEAL +E++ P    R++  N  EW    +G+  + ++G +   FA I  +++G    + D E  ++ S  +SL+FLA+G  + I + +  + FGK+GE LT+RLR   F  +L+QD+++FDDP + TG LT RLA DA++VKGA  SR++V+ Q      + + ++F Y W+LTLL++A VP +   GV+        A K+ K L  +  ++ +A+ N RTV SL +E  F   ++  LQ PY
Sbjct:    4 EGDRNGGAKKKNFFKLNNKSEKDKKEKKPTVSVFSMFRYSNWLDKLYMVVGTLAAIIHGAGLPLMMLVFGEMTDIFANAGNLEDLMSNITNRSDINDTGFFMNLEEDMTRYAYYYSGIGAGVLVAAYIQVSFWCLAAGRQIHKIRKQFFHAIMRQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQSMATFFTGFIVGFTRGWKLTLVILAISPVLGLSAAVWAKILSSFTDKELLAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKRIGIKKAITANISIGAAFLLIYASYALAFWYGTTLVLSGEYSIGQVLTVFFSVLIGAFSVGQASPSIEAFANARGAAYEIFKIIDNKPSIDSYSKSGHKPDNIKGN-LEFRNVHFSYPSRKEVKILKGLNLKVQSGQTVALVGNSGCGKSTTVQLMQRLYDPTEGMVSVDGQDIRTINVRFLREIIGVVSQEPVLFATTIAENIRYGRENVTMDEIEKAVKEANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQVALDKARKGRTTIVIAHRLSTVRNADVIAGFDDGVIVEKGNHDELMKEKGIYFKLVTMQTAGNEVELENAADES---KSEIDAL----------EMSSNDSRS----SLIRKRSTRRSVRGSQAQDRKL---STKEAL-DESIPPVSFWRIMKLNLTEWPYFVVGVFCAIINGGLQPAFAIIFSKIIGVFTRIDDPETKRQNSNLFSLLFLALGIISFITFFLQGFTFGKAGEILTKRLRYMVFRSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGAIGSRLAVITQNIANLGTGIIISFIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTQEQKFEHMYAQSLQVPY 928          

HSP 2 Score: 444.121 bits (1141), Expect = 8.094e-137
Identity = 243/586 (41.47%), Postives = 357/586 (60.92%), Query Frame = 0
Query:  144 YMVFGSLGAIFHGLSLPGQLIIFGQLVNNFIDFTQQRELIRKNATAVAPEDVIDIESEMLFYAQIYAYVAVASWIVGYMQCAFWSISAIRQIQRIRMLFFNSILRQDVGWFD--VNEAGGLTTRMFEDLQQIQSGIGDKVGNTLQAVSTLVGGFGVAFVFGWKLALVMLAVCPLIVMAGALTGKVMASLTSKEQTAYAQAGAIAEQAISSIRTVVAFGGEKEELDSYNAKLVLAEEAGIKKA----ITGAFSMGVFFIVMAGAEALAFWYGSTLVADEDFPPGSLLTVFFSILIGSAQIGQAGPNMEALATAKGAAYYVYQVIKRKSPIDTMNEEGKKPDFYSADQIQFQNIHFHYPSRTDIPVLQGFDLTVNKGQTVALVGESGCGKSTTIKLLQRFYDVIGGSVIIGKDNIKDINVKWLRQHIGIVSQEPVLFDMTIADNIRMGKDN--ATQQEIEQAAINANAHDFITNLPKGYDTNVGEGGAQLSGGQKQRIAIARALIKDPQILLLDEATSALDTESESIVQTALDNASMGRTTIIIAHRLSTVKNADLIVAVQDGRVAEKGTHDELMARKGVYYQLVMLQ 721
            Y V G   AI +G   P   IIF +++  F       E  R+N+                 ++ ++  + + S+I  ++Q   +  +     +R+R + F S+LRQDV WFD   N  G LTTR+  D  Q++  IG ++    Q ++ L  G  ++F++GW+L L++LA+ P+I +AG +  K+++    K++     +G IA +AI + RTVV+   E++    Y   L +     ++KA    IT +F+  + +   AG     F +G+ LVA +      +L VF +++ G+  +GQ        A AK +A ++  +I++   ID+ + EG  P+    + + F  + F+YP+R DIPVLQG  L V KGQT+ALVG SGCGKST ++LL+RFYD + G V++    IK +NV+WLR H+GIVSQEP+LFD +IA+NI  G ++   +Q+EI +AA  AN H FI +LP  Y T VG+ G QLSGGQKQRIAIARAL++ P ILLLDEATSALDTESE +VQ ALD A  GRT I+IAHRLST++NADLIV  Q+GRV E GTH +L+A+KG+Y+ +V +Q
Sbjct:  710 YFVVGVFCAIINGGLQPAFAIIFSKIIGVFTRI-DDPETKRQNSN---------------LFSLLFLALGIISFITFFLQGFTFGKAGEILTKRLRYMVFRSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGAIGSRLAVITQNIANLGTGIIISFIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTQEQKFEHMYAQSLQVPYRNSLRKAHIFGITFSFTQAMMYFSYAGC----FRFGAYLVAHKLMSFEDVLLVFSAVVFGAMAVGQVSSFAPDYAKAKISAAHIIMIIEKTPLIDSYSTEGLMPNTLEGN-VTFGEVVFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPLAGKVLLDGKEIKRLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSRVVSQEEIVRAAKEANIHAFIESLPNKYSTKVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGRVKEHGTHQQLLAQKGIYFSMVSVQ 1274          
The following BLAST results are available for this feature:
BLAST of TCONS_00015022-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MDR18.094e-13744.03Multidrug resistance protein 1 OS=Homo sapiens GN=... [more]
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