TCONS_00014866-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014866-protein
Unique NameTCONS_00014866-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length187

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014866-protein ID=TCONS_00014866-protein|Name=TCONS_00014866-protein|organism=Clytia hemisphaerica|type=polypeptide|length=187bp
RQCIVGESFPERILMLLDFPSNFYKLADQNPRKTLRLFQVFLKKILVGFL
LLCTMEPKKKEYDYDRILISLENCILPSERLDETPSMKDGLDRDTENDLR
SFACEMIQIAGILLKIPQVAMATGQVLLQRFYFSKSMVKLDVEVSAMAAI
FLAAKIEESPRRIRDVINVCHHIKQRMLQNPNKTTPT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008324XLOC_008324Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014866TCONS_00014866Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR006671Cyclin_N
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013763Cyclin-likeGENE3D1.10.472.10coord: 70..185
e-value: 1.2E-28
score: 99.0
IPR013763Cyclin-likeSUPERFAMILY47954Cyclin-likecoord: 72..176
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 87..172
e-value: 4.6E-8
score: 32.8
NoneNo IPR availableCDDcd00043CYCLINcoord: 99..180
e-value: 7.26514E-9
score: 48.7741

Blast
[Close]
BLAST of TCONS_00014866-protein vs. Swiss-Prot (Human)
Match: CCNL2 (Cyclin-L2 OS=Homo sapiens GN=CCNL2 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 2.470e-44
Identity = 74/123 (60.16%), Postives = 94/123 (76.42%), Query Frame = 0 
Query:   64 YDRILISLENCILPSERLDETPSMKDGLDRDTENDLRSFACEMIQIAGILLKIPQVAMATGQVLLQRFYFSKSMVKLDVEVSAMAAIFLAAKIEESPRRIRDVINVCHHIKQRMLQNPNKTTP 186
            Y  +LI+LENC+LP ++L  TPSM  GLD DTE DLR   CE+IQ AGILL++PQVAMATGQVL QRF+++KS VK  +E  +MA + LA+KIEE+PRRIRDVINV H ++Q  L++  K  P
Sbjct:   42 YSGVLITLENCLLPDDKLRFTPSMSSGLDTDTETDLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRQ--LRDKKKPVP 162
The following BLAST results are available for this feature:
BLAST of TCONS_00014866-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCNL22.470e-4460.16Cyclin-L2 OS=Homo sapiens GN=CCNL2 PE=1 SV=1[more]
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