TCONS_00014798-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00014798-protein
Unique Name	TCONS_00014798-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	313

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00014798-protein ID=TCONS_00014798-protein|Name=TCONS_00014798-protein|organism=Clytia hemisphaerica|type=polypeptide|length=313bp
MLIEYTGEGAQCQAAKLLEVIVLQYRGHLDSTIPAFISLCLERLSMDLKT
SELRVMLLQVIISCVISNPILTLSHLEKCVTERYPMGFTNEFLQLWLNDT
DCFLGMHDRKVYVFGICSLLTLPPENRPQAVELFAPQFVPALLVVFKGLI
TMYEKYEKDIEEETEEKPAEEEELNDSDDEYDEEGTQYVEMLNQKRDKGF
DFFDDDEFANELEMFTTPLDDNPYVDEFITFKNTFQGIQAGDGKLFTVMT
QSLNEEQKNNVQFVINTGINKQNKLESMKLEEQGGFQFQVANGGGGGAAP
EQNFNFGGSLPSA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008278	XLOC_008278	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00014798	TCONS_00014798	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 146..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..182
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 4..266 e-value: 1.8E-13 score: 49.1
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 11..263

Blast

[Close]

BLAST of TCONS_00014798-protein vs. Swiss-Prot (Human)
Match: IPO7 (Importin-7 OS=Homo sapiens GN=IPO7 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.032e-51
Identity = 123/319 (38.56%), Postives = 179/319 (56.11%), Query Frame = 0

Query:    6 TGEGAQCQAAKLLEVIVLQYRGH-LDSTIPAFISLCLERLSMDLKTSELRVMLLQVIISCVISNPILTLSHLEKCVTERYPMGF---TNEFLQLWLNDTDCFLGMHDRKVYVFGICSLLTLPPENRPQAVELFAPQFVPALLVVFKGLITMYEKYE----KDIEEETEEKPAEEEELNDSDDEYDEEGTQYVEMLNQK---RDKGFDFFDDDEFANELEMFTTPLD--DNPYVDEFITFKNTFQGIQAGDGKLFTVMTQSLNEEQKNNVQFVINTGINKQNKLESMKLEEQGGFQFQVANGGGGGAAPEQNFNFGGSLP 311
             GE A+C AAKLLEVI+LQ +G  +D  IP F+   LERL+ ++KTSELR M LQV I+ +  NP L L+ LE     R+P      TN F+  WLND DCFLG+HDRK+ V G+C+L+ +  E  PQ +   + Q +PA +++F GL   Y  +        +++  E   E EEL   +D+ DE+G +Y+E+L ++        D+ +DD     LE ++T +D  DNP VDE+  FK  FQ IQ  +   +  +T  LNEEQ+  +Q +      ++   ES  +E+ GG++F           P  +FNFGG  P
Sbjct:  730 AGEDAECHAAKLLEVIILQCKGRGIDQCIPLFVEAALERLTREVKTSELRTMCLQVAIAALYYNPHLLLNTLENL---RFPNNVEPVTNHFITQWLNDVDCFLGLHDRKMCVLGLCALIDM--EQIPQVLNQVSGQILPAFILLFNGLKRAYACHAEHENDSDDDDEAEDDDETEELGSDEDDIDEDGQEYLEILAKQAGEDGDDEDWEEDDAEETALEGYSTIIDDEDNP-VDEYQIFKAIFQTIQNRNPVWYQALTHGLNEEQRKQLQDIATLADQRRAAHESKMIEKHGGYKF------SAPVVPS-SFNFGGPAP 1035

The following BLAST results are available for this feature:

BLAST of TCONS_00014798-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00014798-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
IPO7	1.032e-51	38.56	Importin-7 OS=Homo sapiens GN=IPO7 PE=1 SV=1	[more]

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TCONS_00014798-protein (polypeptide) - C. hemisphaerica