TCONS_00014796-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014796-protein
Unique NameTCONS_00014796-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length592

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014796-protein ID=TCONS_00014796-protein|Name=TCONS_00014796-protein|organism=Clytia hemisphaerica|type=polypeptide|length=592bp
MIWPAIFGIFYFHFFSNVHCITKDPTVLVAINSRNDEHLLPTFFGYLEKL
EYPKTRISILIQTDHNEDDTYELLSTWSTNVRHLYHKIQVSHKAEPLVYS
DAQNSNHFTEQRYLMLLQLRQNAIQEARSQWADYVFFIDTDNFLTDPEIL
QHLIKERRTVIAPLLRATHPKETLYSNFWGETDKNGYYKRSENYPLILSQ
TTKGTFRVPMIHSAILIHLRDSNTDDIQLSPVPASYKGMIDDLLIFAFVI
QKIAKLKFHICNKYTFGFMLVPSDAKLSLNDRRLQFTDAFVRKISEAHGE
EIVRSPNIPHRFPKPTFAEFEEIFVINLKRRKNRFLHMRNSMRELGLKWT
HFEAVDGNNLNKEWMEDLGVKPLTDYKDPTFNSSYVFRPITRGDVGCFLS
HYYVWQEMVERNLDEVLILEDDVRFVSNFRKKLTKLMKTASSLEMKPEKD
WDLLYLGREAKQTSESYVGETDKTLIFPKHSNWAIGYVLRLSGARKLLAG
GEGFAKMVPVDEYLTIKFNKHEDKVLMKQYDTRDLIAISATNHLIEPTHL
PMQDGYYSDTKNSLLIDGSKPPGNPQVDDDDHLQKKSTRTDL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008277XLOC_008277Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014796TCONS_00014796Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR002654Glyco_trans_25
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13704Glyco_tranf_2_4coord: 34..148
e-value: 8.9E-15
score: 54.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 561..592
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 21..247
e-value: 1.1E-8
score: 34.6
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 120..182
coord: 23..87
IPR002654Glycosyl transferase, family 25PFAMPF01755Glyco_transf_25coord: 321..513
e-value: 7.0E-33
score: 114.1
IPR002654Glycosyl transferase, family 25CDDcd06532Glyco_transf_25coord: 322..514
e-value: 1.57306E-33
score: 123.481

Blast
[Close]
BLAST of TCONS_00014796-protein vs. Swiss-Prot (Human)
Match: GT252 (Procollagen galactosyltransferase 2 OS=Homo sapiens GN=COLGALT2 PE=1 SV=1)

HSP 1 Score: 387.882 bits (995), Expect = 2.021e-127
Identity = 219/551 (39.75%), Postives = 321/551 (58.26%), Query Frame = 0 
Query:   23 KDPTVLVAINSRNDEHLLPTFFGYLEKLEYPKTRISILIQTDHNEDDTYELLSTWSTNVRHLYHKIQVSHKAEPLVYSDAQNSNHFTEQRYLMLLQLRQNAIQEARSQWADYVFFIDTDNFLTDPEILQHLIKERRTVIAPLLRATHPKETLYSNFWGETDKNGYYKRSENYPLILSQTTKGTFRVPMIHSAILIHLRDSNTDDIQLSPVPASYKGMIDDLLIFAFVIQKIAKLKFHICNKYTFGFMLVPSDAKLSLNDRRLQFTDAFVRKISEAHGEEIVRSPNIPHRF----PK-PTFAEFEEIFVINLKRRKNRFLHMRNSMRELGLKWTHFEAVDGNNLNKEWMEDLGVKPLTDYKDPTFNSSYVFRPITRGDVGCFLSHYYVWQEMVERNLDEVLILEDDVRFVSNFRKKLTKLMKTASSLEMKPEKDWDLLYLGREAKQTSESYVGETD-KTLIFPKHSNWAIGYVLRLSGARKLLAGGEGFAKMVPVDEYLTIKFNKHEDKVLMKQYDTRDLIAISATNHLIEPTHLPMQDGYYSDTKNSLLID 567
            + PTVLVA+ +RN  H LP F G LE+L+YPK+R++I   TDHN D+T E+   W  NV+ LYH ++     EP  Y D     H+   R+  +++LRQ A++ AR +W+DY+ FID DNFLT+P+ L  LI E +T++AP+L +      LYSNFW      G+YKR+ +Y  I      G F VPM+HS  LI LR   +D +   P    Y    DD+++FAF  ++ A ++ ++CN+  +G++ +P     +L +         +  +       I R P  P ++    PK P    F+EIF+INLKRRK+R   M  ++ E  ++    EAVDG  LN   ++ L ++ L  Y+DP     Y  RP+TRG++GCFLSHY VW+E+++R L++ L++EDDVRF   F+KKL KLM      ++    DW+L+Y+GR+  Q  E      +   L+   +S W +GYV+ L GA+KL+ G   F KM+PVDE+L + +NKH      + Y++RDL A SA   LI PTH   Q GY SDT+ S + D
Sbjct:   51 QSPTVLVAVLARNAAHTLPHFLGCLERLDYPKSRMAIWAATDHNVDNTTEIFREWLKNVQRLYHYVEWRPMDEPESYPDEIGPKHWPTSRFAHVMKLRQAALRTAREKWSDYILFIDVDNFLTNPQTLNLLIAENKTIVAPMLES----RGLYSNFWCGITPKGFYKRTPDYVQIREWKRTGCFPVPMVHSTFLIDLRKEASDKLTFYPPHQDYTWTFDDIIVFAFSSRQ-AGIQMYLCNREHYGYLPIPLKPHQTLQEDIENLIHVQIEAM-------IDRPPMEPSQYVSVVPKYPDKMGFDEIFMINLKRRKDRRDRMLRTLYEQEIEVKIVEAVDGKALNTSQLKALNIEMLPGYRDP-----YSSRPLTRGEIGCFLSHYSVWKEVIDRELEKTLVIEDDVRFEHQFKKKLMKLMDNIDQAQL----DWELIYIGRKRMQVKEPEKAVPNVANLVEADYSYWTLGYVISLEGAQKLV-GANPFGKMLPVDEFLPVMYNKHPVAEYKEYYESRDLKAFSAEPLLIYPTHYTGQPGYLSDTETSTIWD 579
The following BLAST results are available for this feature:
BLAST of TCONS_00014796-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GT2522.021e-12739.75Procollagen galactosyltransferase 2 OS=Homo sapien... [more]
back to top