TCONS_00014768-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00014768-protein
Unique Name	TCONS_00014768-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	572

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00014768-protein ID=TCONS_00014768-protein|Name=TCONS_00014768-protein|organism=Clytia hemisphaerica|type=polypeptide|length=572bp
PYSLPCKAIILYFMYFRSFFIAVTIYFIYRKNLYLSNHKVMATWGIDLWD
QRDIVEKHTSNGIDFLERCASFVKERIRIEQEYAKSLRRLVKQYQFKQKK
TEEILPYTYQQAFKQFLQETDDFAGQREVIAEETKNNVLNDMHNVASQSK
NERKKALQNLNDLKSHLDQLQKALNVAKAKYEKASDDSNSAYKNYETATQ
SLDMTKAQILKFQKTSQDKKAHMDKCKDDYQNALENFNKTQQLYYQADFP
NTVMKELQTPEENRVQKLANYFKEMSNIMRKVQPIITACLDGMVKAGDTC
DPGKDSLTVIDRNKTGEYPPHDLLFEEWGKPHGSTNSLAPSPHVGGGRSK
KAGKSTRGKTEKSQIIDPNIADTFSELPIAQREKKYNQKIHELTEQIAHE
EKSMAALMKMKDTTASFGGDGNTMQDQFNASDKEIKRLKNLLSQYQAYLD
ALKDSRNPRPVSTISTASTNDFPPPPVAKQPELQQHQNVPPPPSAEQAPP
PPPPLPAQGEFQDEFDDIKCSVLYDFGGSNEGEMTVFAGEELVITEDDDG
GWTRVIRGDEEGYIPTSYIQKI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008266	XLOC_008266	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00014768	TCONS_00014768	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001452	SH3_domain
IPR001060	FCH_dom
IPR031160	F_BAR
IPR027267	AH/BAR-dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 435..455
None	No IPR available	COILS	Coil	Coil	coord: 383..410
None	No IPR available	COILS	Coil	Coil	coord: 146..187
None	No IPR available	GENE3D	2.30.30.40		coord: 476..572 e-value: 9.7E-14 score: 50.7
None	No IPR available	GENE3D	1.10.287.620		coord: 81..268 e-value: 6.5E-5 score: 21.9
None	No IPR available	GENE3D	1.10.287.160		coord: 370..455 e-value: 2.1E-4 score: 21.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..363
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 453..511
None	No IPR available	CDD	cd11911	SH3_CIP4-like	coord: 519..570 e-value: 2.23207E-21 score: 87.315
IPR001452	SH3 domain	SMART	SM00326	SH3_2	coord: 518..571 e-value: 4.0E-8 score: 43.0
IPR001452	SH3 domain	PFAM	PF00018	SH3_1	coord: 522..566 e-value: 5.4E-8 score: 32.2
IPR001452	SH3 domain	PROSITE	PS50002	SH3	coord: 522..572 score: 12.516
IPR001452	SH3 domain	SUPERFAMILY	50044	SH3-domain	coord: 484..572
IPR001060	FCH domain	SMART	SM00055	fch_2	coord: 41..134 e-value: 9.7E-14 score: 61.6
IPR001060	FCH domain	PFAM	PF00611	FCH	coord: 53..128 e-value: 2.0E-17 score: 63.2
IPR031160	F-BAR domain	PROSITE	PS51741	F_BAR	coord: 42..305 score: 33.898
IPR027267	Arfaptin homology (AH) domain/BAR domain	SUPERFAMILY	103657	BAR/IMD domain-like	coord: 44..328

Blast

[Close]

BLAST of TCONS_00014768-protein vs. Swiss-Prot (Human)
Match: FBP1L (Formin-binding protein 1-like OS=Homo sapiens GN=FNBP1L PE=1 SV=3)

HSP 1 Score: 200.675 bits (509), Expect = 9.635e-57
Identity = 116/287 (40.42%), Postives = 168/287 (58.54%), Query Frame = 0

Query:   43 TWGIDLWDQRDIVEKHTSNGIDFLERCASFVKERIRIEQEYAKSLRRLVKQYQFKQKKTEEILPYTYQQAFKQFLQETDDFAGQREVIAEETKNNVLNDMHNVASQSKNERKKALQNLNDLKSHLDQLQKALNVAKAKYEKASDDSNSAYKNYETATQSLDMTKAQILKFQKTSQDKKAHM-DKCKDDYQNALENFNKTQQLYYQADFPNTVMKELQTPEENRVQKLANYFKEMSNIMRKVQPIITACLDGMVKAGDTCDPGKDSLTVIDRNKTGEYPPHDLLFEEW 328
            +WG +LWDQ D ++KHT  GIDFLER A FVKERI IEQ YAK LR LVK+Y  K+   +E   +T   AF   L E +D+AGQREV+AEE  + V  ++   A   K ERK  LQ     + +LD   K ++ +K K+E+   ++  A ++YE      + TKA + K  K   + + HM D+ K++Y   L+NFN  Q  ++    P  + K+LQ  +E R  KL+  ++  ++  RKV PII+ CL+GM+ A  + D  +DS  V+D  K+G  PP D  FE++
Sbjct:    2 SWGTELWDQFDSLDKHTQWGIDFLERYAKFVKERIEIEQNYAKQLRNLVKKYCPKRSSKDEEPRFTSCVAFFNILNELNDYAGQREVVAEEMAHRVYGELMRYAHDLKTERKMHLQEGRKAQQYLDMCWKQMDNSKKKFERECREAEKAQQSYERLDNDTNATKADVEK-AKQQLNLRTHMADENKNEYAAQLQNFNGEQHKHFYVVIPQ-IYKQLQEMDERRTIKLSECYRGFADSERKVIPIISKCLEGMILAAKSVDERRDSQMVVDSFKSGFEPPGDFPFEDY 286

HSP 2 Score: 86.6557 bits (213), Expect = 7.366e-18
Identity = 77/246 (31.30%), Postives = 107/246 (43.50%), Query Frame = 0

Query:  342 PHVGGGRSKKAGKSTRGKTEKSQIIDPNIADTFSELPIAQREKKYNQKIHELTEQIAHEEKSMAALMKMKDTTASF--GGDGNTMQDQFNASDKEIKRLKNLLSQYQAYLDALK-------DSRNPRPVSTIST-------ASTNDFPPPPVAKQPELQQHQNVPPPPSAEQAPPPPPPLPAQGEFQDEFDDIKCSVLYDFGGSNEGEMTVFAGEELVITEDDDG-GWTRVIRGD-EEGYIPTSYI 569
            P +   RS K G S +        + P + D FS LP  QR KK  Q+I EL  ++  E     AL KMKD        GD  ++Q +   +   I RL+  + + +A+L  ++       D R+   ++ + T        S  D     V   P+   H N       +       PLPA G          C  +Y F G NEG + +  GE L I E+D G GWTR  R + EEGY+PTSYI
Sbjct:  372 PRIPSFRSLKRGWSVK--------MGPALED-FSHLPPEQRRKKLQQRIDELNRELQKESDQKDALNKMKDVYEKNPQMGDPGSLQPKLAETMNNIDRLRMEIHKNEAWLSEVEGKTGGRGDRRHSSDINHLVTQGRESPEGSYTDDANQEVRGPPQQHGHHNEFDDEFEDDD-----PLPAIGH---------CKAIYPFDGHNEGTLAMKEGEVLYIIEEDKGDGWTRARRQNGEEGYVPTSYI 594

The following BLAST results are available for this feature:

BLAST of TCONS_00014768-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00014768-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FBP1L	9.635e-57	40.42	Formin-binding protein 1-like OS=Homo sapiens GN=F...	[more]

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TCONS_00014768-protein (polypeptide) - C. hemisphaerica