TCONS_00014748-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014748-protein
Unique NameTCONS_00014748-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length427

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014748-protein ID=TCONS_00014748-protein|Name=TCONS_00014748-protein|organism=Clytia hemisphaerica|type=polypeptide|length=427bp
MHALAAGSIGNSELPRRYRTSRFNLNVSSPQGSVASEQKNTGKPKIVINI
SGMIFETYASTLNKYPDTLLGTPLKRSLITDRRTKQIYLERNRNSFDAIL
FYYQSSGCLIRPSNVSMIDFEEECAYFDLPQDAVKRMKCRDGFLHKRETK
LPGYKYYRDFQYTLWQFFEFPKEFKNRSAMVYFVFSFALIFASIAIFCVE
SEILLLNWKSARLKEYYYIQQSIELALNVYFAMELLARFFATPIKKRFFE
KILNNIEITSVILFLGAIWLPSHFVTKWAINLSRILRAFRISRLARMSAM
IKTSILVFKSSVNDILAVWFTILIICVLCGSTMYYVEMSEPGTNFTSIPM
SMWWAMQTVLCLGYGDIVPTSVPGKIIGAAMLYYGVVTVMVLVLALGSRF
FDMYAKFLNKDSWLPEENNKEQDLSFP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008252XLOC_008252Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014748TCONS_00014748Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028325VG_K_chnl
IPR003131T1-type_BTB
IPR005821Ion_trans_dom
IPR011333SKP1/BTB/POZ
Vocabulary: Biological Process
TermDefinition
GO:0006813potassium ion transport
GO:0051260protein homooligomerization
GO:0055085transmembrane transport
GO:0006811ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0005249voltage-gated potassium channel activity
GO:0005216ion channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0008076voltage-gated potassium channel complex
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
biological_process GO:0006813 potassium ion transport
biological_process GO:0051260 protein homooligomerization
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
cellular_component GO:0008076 voltage-gated potassium channel complex
molecular_function GO:0005216 ion channel activity
molecular_function GO:0005249 voltage-gated potassium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028325Voltage-gated potassium channelPRINTSPR00169KCHANNELcoord: 86..105
score: 40.0
coord: 374..400
score: 30.97
coord: 173..201
score: 25.84
coord: 285..311
score: 31.0
coord: 248..268
score: 24.59
coord: 345..367
score: 52.85
coord: 222..245
score: 36.51
coord: 314..337
score: 19.2
NoneNo IPR availableGENE3D1.20.120.350coord: 178..308
e-value: 5.3E-15
score: 54.8
NoneNo IPR availableGENE3D3.30.710.10coord: 33..154
e-value: 1.7E-17
score: 62.9
NoneNo IPR availableGENE3D1.10.287.70coord: 309..407
e-value: 2.1E-14
score: 52.5
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 179..400
IPR003131Potassium channel tetramerisation-type BTB domainPFAMPF02214BTB_2coord: 46..135
e-value: 5.8E-20
score: 71.4
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 182..394
e-value: 6.3E-18
score: 64.8
IPR011333SKP1/BTB/POZ domainSUPERFAMILY54695POZ domaincoord: 45..139

Blast
[Close]
BLAST of TCONS_00014748-protein vs. Swiss-Prot (Human)
Match: KCNA3 (Potassium voltage-gated channel subfamily A member 3 OS=Homo sapiens GN=KCNA3 PE=1 SV=3)

HSP 1 Score: 216.083 bits (549), Expect = 2.932e-64
Identity = 137/409 (33.50%), Postives = 216/409 (52.81%), Query Frame = 0 
Query:   30 PQGSVASEQKNTGKPKIVINISGMIFETYASTLNKYPDTLLGTPLKRSLITDRRTKQIYLERNRNSFDAILFYYQSSGCLIRPSNVSMIDFEEECAYFDLPQDAVKRMKCRDGFLHKRETKLPGYKYYRDFQYTLWQFFEFPKEFKNRSAMVYFVFSFALIFASIAIFCVESEILLLNWKSARLKEYYYIQQSIELALN------------------------VYFAMELLARFFATPIKKRFFEKILNNIEITSVILF---LGAIWLPSHFVTKWAINLS-----RILRAFRISRLARMSAMIKTSILVFKSSVNDILAVWFTILIICVLCGSTMYYVEMSEPGTNFTSIPMSMWWAMQTVLCLGYGDIVPTSVPGKIIGAAMLYYGVVTVMVLVLALGSRFFDMYAK 406
            P    A EQ   G+ ++VINISG+ FET   TL ++P+TLLG P +R    D    + + +RNR SFDAIL+YYQS G + RP NV +  F EE  ++ L ++A+++ +  +GFL + E  LP     RDFQ  +W  FE+P+   +  A    + S  +I  SI IFC+E+   L  ++  +       Q S E A N                        ++F+ ELL RFFA P K  F   I+N I+I ++I +   LG          + A++L+     R++R FRI +L+R S  ++      K+S+ ++  + F + I  +L  S +Y+ E  +P + F+SIP + WWA+ T+  +GYGD+ P ++ GKI+G+     GV+T+ + V  + S F   Y +
Sbjct:   91 PSLPAAGEQDCCGE-RVVINISGLRFETQLKTLCQFPETLLGDPKRRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRIRRPVNVPIDIFSEEIRFYQLGEEAMEKFREDEGFLREEERPLP----RRDFQRQVWLLFEYPE--SSGPARGIAIVSVLVILISIVIFCLET---LPEFRDEKDYPASTSQDSFEAAGNSTSGSRAGASSFSDPFFVVETLCIIWFSFELLVRFFACPSKATFSRNIMNLIDIVAIIPYFITLGTELAERQGNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADDPTSGFSSIPDAFWWAVVTMTTVGYGDMHPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHR 489
The following BLAST results are available for this feature:
BLAST of TCONS_00014748-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCNA32.932e-6433.50Potassium voltage-gated channel subfamily A member... [more]
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