TCONS_00014603-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014603-protein
Unique NameTCONS_00014603-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length270

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014603-protein ID=TCONS_00014603-protein|Name=TCONS_00014603-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
MVEFVVSECPTVPLTKTQHGHAVISKDTLDIKTRQDPAILPLKSCIQIPN
PDGSGEKLNIKKAKSVHFADSLGKPLKSVKTLCDLEDDLDLLFLGLKTNY
SSTRRSFPVRDKKTSQKFDFVNFKPPITEPNFLERVQKENVLLENIFVKD
NKVLGTVNVKNISFEKDVSITYTLNDWETVQNARGKYVPGSSTGTIDIFS
FEITFPEDTACNIKFAICYKAAKKEFWDSNESKNYILAIKTKSPKKKLID
DSDNFNGFIISKQNFIGWAS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008169XLOC_008169Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014603TCONS_00014603Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR005036CBM21_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 145..254
e-value: 5.5E-19
score: 67.9
IPR005036CBM21 (carbohydrate binding type-21) domainPFAMPF03370CBM_21coord: 136..237
e-value: 8.5E-27
score: 93.5
IPR005036CBM21 (carbohydrate binding type-21) domainPROSITEPS51159CBM21coord: 133..238
score: 21.565

Blast
[Close]
BLAST of TCONS_00014603-protein vs. Swiss-Prot (Human)
Match: PPR3D (Protein phosphatase 1 regulatory subunit 3D OS=Homo sapiens GN=PPP1R3D PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.882e-24
Identity = 61/216 (28.24%), Postives = 103/216 (47.69%), Query Frame = 0 
Query:   32 KTRQDPAILPLKSCIQIPNPDGSGEKLNIKKAKSVHFADSLGKPLKSVKTLCDLEDDLDLLFLGLKTNYSSTRRSFPVRDKKTSQKFDFVNFKPPITEPNFLERVQKENVLLENIFVKDNKVLGTVNVKNISFEKDVSITYTLNDWETVQNARGKYV-PGSSTGTIDIFSFEITFPE---DTACNIKFAICYKAAKKEFWDSNESKNYILAIKTKS 243
            + RQ  A  P  +C       G  +KL ++      FAD+LG  L  VK   +  DD  +    L     ++      +D + +      +F PP+   +F ER+Q++ V LE +   D  + GTV V N++FEK V++ YT + W +   A  ++  P    GT D+F+F    P    +    + FA+ Y+ A  E+WD+N+ ++Y L  +  +
Sbjct:   80 ERRQKAAGAPGAACRP-----GCSQKLRVR------FADALGLELAQVKVF-NAGDDPSVPLHVLSRLAINSDLCCSSQDLEFTLHCLVPDFPPPVEAADFGERLQRQLVCLERVTCSDLGISGTVRVCNVAFEKQVAVRYTFSGWRSTHEAVARWRGPAGPEGTEDVFTFGFPVPPFLLELGSRVHFAVRYQVAGAEYWDNNDHRDYSLTCRNHA 283
The following BLAST results are available for this feature:
BLAST of TCONS_00014603-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPR3D7.882e-2428.24Protein phosphatase 1 regulatory subunit 3D OS=Hom... [more]
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