TCONS_00014582-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00014582-protein
Unique Name	TCONS_00014582-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	474

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00014582-protein ID=TCONS_00014582-protein|Name=TCONS_00014582-protein|organism=Clytia hemisphaerica|type=polypeptide|length=474bp
CEDKLESALQNGDRVVLMDVKLNEITDRMKCILQSYQKFTGSNKPFKLLV
GNKEIDCSPNFRLVLLTSKKCIEIPPSNFYHRINIPMSRELLDEIFLDFF
ISKEKSQLNDALRNVNQEMLSFIELLENHESELLSTLAERRCFGQISTVR
RILNIKKLFDEAYFGKCRAEEVYENIRETRETYLPIARQAAVLFTVAANM
TEINEFYQLTIERFMEYFASAIKHSDRVAVPAAVDRVLNSLFHVILKSRF
EEDRMLFTLMVAIETEDIHQRITIGCREFLIDPRLGAAIKQYQAEVQSNI
KINASIKKPFDWMTDEQYQYLLILSQNFDWFAETFDKMAKDGREMQWRQI
AEHDTPELVALPDHLDERYTPVQRFLVIKAFRPDRFMQAAQIFIATTLGK
NLVTDSVLDLRLITAQNPVTIPILLVFKKDAFLSYYLLRQHALAKQVSLT
EMEMNGQTGKTEVLEALQECANKV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008159	XLOC_008159	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00014582	TCONS_00014582	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004273	Dynein_heavy_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0030286	dynein complex

Vocabulary: **Biological Process**
Term	Definition
GO:0007018	microtubule-based movement

Vocabulary: **Molecular Function**
Term	Definition
GO:0003777	microtubule motor activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007018	microtubule-based movement
cellular_component	GO:0030286	dynein complex
molecular_function	GO:0003777	microtubule motor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 112..132
None	No IPR available	PFAM	PF12781	AAA_9	coord: 3..139 e-value: 2.4E-11 score: 43.1
None	No IPR available	GENE3D	3.40.50.300		coord: 1..115 e-value: 0.013 score: 14.5
IPR004273	Dynein heavy chain domain	PFAM	PF03028	Dynein_heavy	coord: 311..437 e-value: 9.7E-21 score: 73.6

Blast

[Close]

BLAST of TCONS_00014582-protein vs. Swiss-Prot (Human)
Match: DYH10 (Dynein heavy chain 10, axonemal OS=Homo sapiens GN=DNAH10 PE=1 SV=4)

HSP 1 Score: 108.997 bits (271), Expect = 5.026e-25
Identity = 98/396 (24.75%), Postives = 181/396 (45.71%), Query Frame = 0

Query:   48 LLVGNKEIDCSPNFRLVLLTSKKCIEIPPSNFYHR--INIPMSRELLDEIFLDFFISKEKSQLNDALRNVNQEMLSFIELLENHESELLSTLAER--RCFGQISTVRRILNIKKLFDEAYFGKCRAEEVYENIRETRETYLPIARQAAVLFTVAANMTEINEFYQLTIERFMEYFASAIKHS--DRVAVP---AAVDRVLNSLFHVILKSRFEEDRMLFTLMVAIETEDIHQRITIGCREFLIDPRLGAAIKQYQAEVQSNIKINASI-KKPFDWMTDEQYQYLLILSQNFDWFAETFDKMAKDGREMQ--WRQIAEHDTPELVALPDHLDERYTPVQRFLVIKAFRPDRFMQAAQIFIATTLGKNLVTDSVLDLRLITAQNPVTIPILLVFKKDA 431
            +++G+KE+D   NFRL L T        PS F     IN  ++ + L++  L   ++ E+ +L +   ++ QE      LL++ E  LL  LA         +  V  +   K    E       AE+   +I   R+ Y P AR+ A+LF V + M  +N  YQ ++  F+E F  ++K S  D + +      +D +  S+++      FE  ++LF+  + I+ E    R+     +F +               + NI +  S  KKP  W++D+ ++ +++LS+ F   ++ F ++  D    Q  W++  + D+ E   +P   D   TP Q+ L+++ FR DR  +A   ++  T+G+  V   ++    I  Q+    PI+ +    +
Sbjct: 3509 IILGDKEVDYDSNFRLYLNTKLANPRYSPSVFGKAMVINYTVTLKGLEDQLLSVLVAYERRELEEQREHLIQETSENKNLLKDLEDSLLRELATSTGNMLDNVDLVHTLEETKSKATEVSEKLKLAEKTALDIDRLRDGYRPAARRGAILFFVLSEMALVNSMYQYSLIAFLEVFRLSLKKSLPDSILMKRLRNIMDTLTFSIYNHGCTGLFERHKLLFSFNMTIKIEQAEGRVPQEELDFFL---------------KGNISLEKSKRKKPCAWLSDQGWEDIILLSEMF---SDNFGQLPDDVENNQTVWQEWYDLDSLEQFPVPLGYDNNITPFQKLLILRCFRVDRVYRAVTDYVTVTMGEKYVQPPMISFEAIFEQSTPHSPIVFILSPGS 3886

The following BLAST results are available for this feature:

BLAST of TCONS_00014582-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00014582-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DYH10	5.026e-25	24.75	Dynein heavy chain 10, axonemal OS=Homo sapiens GN...	[more]

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TCONS_00014582-protein (polypeptide) - C. hemisphaerica