TCONS_00014469-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00014469-protein
Unique Name	TCONS_00014469-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	434

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00014469-protein ID=TCONS_00014469-protein|Name=TCONS_00014469-protein|organism=Clytia hemisphaerica|type=polypeptide|length=434bp
LRLNMEENGYHFIQRTNGSTISETFTFPPFKIKPGYAKRDFTEPYRIIYI
VICSILALISIVGNITLVTVISSRHKLRTATNLLLLSLATADLLTSVVYT
PLYLERFYNQNANNSHPKLCLLRKYFFIVTASGSLISLAVVSFDRMFAIA
YPYKYERWMTKRLACIVICIVWFWTICFNSITFHDFLHWGRILSTCVGGI
PRKLFLIIGPPGFYIPGITIVVVYIKIYLVARKLNIKVEHDCKLSVSSNE
ILMTDLSNSSNHLYLTPPLSQKKLGIRRTSSLPVIKAFTGDINNSTRDAN
KTSLPFLMSHTLSTPTLKPRSSSTLISQTLHGGKETIRKVKKSIKRDIRT
VRTIAMLVGFFLVCWMPTAGFYIYINIMGSSGTSVSQQVLLCYEIFMVLT
FVNSALNPFLYTYRNKELRKETMKFARKLFRIGR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_008095	XLOC_008095	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00014469	TCONS_00014469	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000276	GPCR_Rhodpsn
IPR017452	GPCR_Rhodpsn_7TM

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000276	G protein-coupled receptor, rhodopsin-like	PRINTS	PR00237	GPCRRHODOPSN	coord: 127..149 score: 27.39 coord: 205..228 score: 23.5 coord: 81..102 score: 36.21 coord: 48..72 score: 21.41 coord: 350..374 score: 27.08 coord: 393..419 score: 29.79
IPR000276	G protein-coupled receptor, rhodopsin-like	SMART	SM01381	7TM_GPCR_Srsx_2	coord: 57..426 e-value: 3.2E-5 score: -32.6
IPR000276	G protein-coupled receptor, rhodopsin-like	PFAM	PF00001	7tm_1	coord: 63..411 e-value: 1.5E-37 score: 129.2
None	No IPR available	GENE3D	1.20.1070.10		coord: 30..429 e-value: 5.0E-58 score: 195.9
None	No IPR available	SUPERFAMILY	81321	Family A G protein-coupled receptor-like	coord: 336..430 coord: 41..236
IPR017452	GPCR, rhodopsin-like, 7TM	PROSITE	PS50262	G_PROTEIN_RECEP_F1_2	coord: 63..411 score: 35.678

Blast

[Close]

BLAST of TCONS_00014469-protein vs. Swiss-Prot (Human)
Match: DRD2 (D(2) dopamine receptor OS=Homo sapiens GN=DRD2 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 2.784e-23
Identity = 115/442 (26.02%), Postives = 194/442 (43.89%), Query Frame = 0

Query:   29 PFKIKPGYAKRDFTEPYRIIYIVICSILALISIVGNITLVTVISSRHKLRTATNLLLLSLATADLLTSVVYTP--LYLERFYNQNANNSHPKLCLLRKYFFIVTASGSLISLAVVSFDRMFAIAYPYKYE-RWMTKRLACIVICIVWFWTICFNSITFHDFLHWGRILSTCVGGIPRKLFLIIGP-PGFYIPGITIVVVYIKIYLVARKLNIKVEHDCKLSVSSNEILMTDLSNSSNHLYLTPPLSQKKLGI--RRTSSLPV----------IKAFTGDINNSTRDANKT------------SLPFLMSHTL-STPTL------------KPRSSSTLISQTLHGGK-----ETIRKVKKSIKRDIRTVRTIAMLVGFFLVCWMPTAGFYIYINIMGSSGTSVSQQVLLCYEIFMVLTFVNSALNPFLYTYRNKELRKETMK 424
            PF    G A R    P+   Y  + ++L  + + GN+ +   +S    L+T TN L++SLA ADLL + +  P  +YLE       +  H   C +     ++  + S+++L  +S DR  A+A P  Y  R+ +KR   ++I IVW  +   +        +  +  + C+   P   F++      FY+P I  ++VYIKIY+V R+   +V    + S +    L   L  +  H     P   K   +  +   S PV           +    ++ +ST    +T            +LP    H L STP               P+ +     QT+  GK     +T+ + K S +++ +  + +A+++G F++CW+P   F+I  +I+          VL  Y  F  L +VNSA+NP +YT  N E RK  +K
Sbjct:   21 PFNGSDGKADR----PHYNYYATLLTLLIAVIVFGNVLVCMAVSREKALQTTTNYLIVSLAVADLLVATLVMPWVVYLEVVGEWKFSRIH---CDIFVTLDVMMCTASILNLCAISIDRYTAVAMPMLYNTRYSSKRRVTVMISIVWVLSFTISCPLLFGLNNADQ--NECIIANPA--FVVYSSIVSFYVPFIVTLLVYIKIYIVLRRRRKRVNTK-RSSRAFRAHLRAPLKGNCTH-----PEDMKLCTVIMKSNGSFPVNRRRVEAARRAQELEMEMLSSTSPPERTRYSPIPPSHHQLTLPDPSHHGLHSTPDSPAKPEKNGHAKDHPKIAKIFEIQTMPNGKTRTSLKTMSRRKLSQQKEKKATQMLAIVLGVFIICWLP---FFI-THILNIHCDCNIPPVL--YSAFTWLGYVNSAVNPIIYTTFNIEFRKAFLK 439

The following BLAST results are available for this feature:

BLAST of TCONS_00014469-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00014469-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DRD2	2.784e-23	26.02	D(2) dopamine receptor OS=Homo sapiens GN=DRD2 PE=...	[more]

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TCONS_00014469-protein (polypeptide) - C. hemisphaerica