TCONS_00014394-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014394-protein
Unique NameTCONS_00014394-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length257

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014394-protein ID=TCONS_00014394-protein|Name=TCONS_00014394-protein|organism=Clytia hemisphaerica|type=polypeptide|length=257bp
MSKDANKFKFGNLHLKNAEEVSNYTKTFIEQAEYNITQCIPDKIFLLEKL
DKEEFKCYKDIASIEVDIELSQEAINFSRKNQNNDEAPSNPAVKKRKLDN
GEDNDSKIPSVPCNKKLIKLIDLLKPEIKDLITTCEKLKTWIQLLIPKIE
DGNNFGVSIQEEVLNEVHRIEADSINYLDGISRYFITRGKIVSKVAKYPY
LDDYKRAIKEVDEKEYLTLLFSVNDIKSHYLLILDLVSKNYEKIKKPRSQ
SNIDSMY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008055XLOC_008055Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014394TCONS_00014394Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003185Proteasome_activ_pa28_N
IPR003186Proteasome_activ_pa28_C
IPR009077Proteasome_activ_pa28
Vocabulary: Cellular Component
TermDefinition
GO:0008537proteasome activator complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0008537 proteasome activator complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003185Proteasome activator pa28, N-terminal domainPFAMPF02251PA28_alphacoord: 17..70
e-value: 4.7E-5
score: 23.2
IPR003185Proteasome activator pa28, N-terminal domainGENE3D1.20.5.120coord: 16..69
e-value: 2.7E-6
score: 27.0
IPR003186Proteasome activator pa28, C-terminal domainPFAMPF02252PA28_betacoord: 111..251
e-value: 2.0E-58
score: 196.1
IPR003186Proteasome activator pa28, C-terminal domainGENE3D1.20.120.180coord: 111..249
e-value: 2.7E-55
score: 185.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..107
IPR009077Proteasome activator pa28SUPERFAMILY47216Proteasome activatorcoord: 111..249
coord: 16..72

Blast
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BLAST of TCONS_00014394-protein vs. Swiss-Prot (Human)
Match: PSME3 (Proteasome activator complex subunit 3 OS=Homo sapiens GN=PSME3 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.236e-58
Identity = 98/245 (40.00%), Postives = 158/245 (64.49%), Query Frame = 0 
Query:   21 VSNYTKTFIEQAEYNITQCIPDKIFLLEKLDKEEFKCYKDIASIEVDIELS-QEAINFSRKNQNNDEAPSNPAVKKRKLDNGED--NDSKIPSVP-----CNKKLIKLIDLLKPEIKDLITTCEKLKTWIQLLIPKIEDGNNFGVSIQEEVLNEVHRIEADSINYLDGISRYFITRGKIVSKVAKYPYLDDYKRAIKEVDEKEYLTLLFSVNDIKSHYLLILDLVSKNYEKIKKPRSQSNIDSMY 257
            V ++ +    +AE  +    P K+  L+   KE      D+  I  D+ L   + I  +    N+ +    P  KKR+LD  E+    +K+  +P      N++L+ +I+ +KPEI+ LI  C  +K W+QLLIP+IEDGNNFGVSIQEE + E+  +E+++ +YLD ISRY+ITR K+VSK+AKYP+++DY+R + E+DEKEY++L   ++++++ Y+ + D++ KN EKIK+PRS SN +++Y
Sbjct:   15 VDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLT----NSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKNIEKIKRPRS-SNAETLY 254
The following BLAST results are available for this feature:
BLAST of TCONS_00014394-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PSME34.236e-5840.00Proteasome activator complex subunit 3 OS=Homo sap... [more]
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