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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00014329-protein ID=TCONS_00014329-protein|Name=TCONS_00014329-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1697bp
MRFVVLLTLVATALAQQNKNEYDRIFDQSTIKTKTSFKGGDTSYTFAYQA
QMKTLNPVIKSQSTGIKFKCLVLVNFLNEGSGNFRVRMELQNPQFFATAE
NPSHNYQIPTQTNIPIKQDILQELQRHIFFRYRNGVVKHIFHKNNEETLV
VNLKRGIINLFSVDTLQQNFDETPFSKKLEKTIHGICNCSYTVLNEKEDV
YNITKTIHTDQCRNNRNVFLSSIQSENRNSDSSSNTIRQQTTMNIELYQV
QSNFKIFSVNATGLTMLYLLGEKRQPVMGTTHQILRLVQEKKTSKTYDYP
IWRARDLMFYSPPQRTTLHRLNYKDTQKLGQFVHDTLVKLSTDHGDVTKP
FTKEYGFKMMTLVNTLRPMRFNQLNIVWDKCLGNPKIRDLFMRFYSMLRT
YDSMNLLNRKLRDDAGYVKPGMMINYFQMMTSPDYTDRQMVVKMKEICSS
YYVRTKSQVQRACLLTAATLRRRFCSEKMCLWLQMPTEIRRNMAIQKFIT
LSEFEQIDYIQIAKSGSHSQMIQPLMSIIKNNDVSIRVRRYAILALAPLA
RSQTRTRVTNHLLKLLLHDTKQHEDLRRAVFQVLLENPTPSIISTCANYM
IKERSVNIRRFIFDRLQSIARSKPDEGFQESKPAAQSAINFIKTQNLVPS
NLRWIPQHYSGILKSPATGFSNMKISWDSQIHYTNESFLPKYILGQFDAK
IFGRRFNLMDFQLETQGVQEFLARLSGYSPKDASNQTDLRLHCDVRLFGT
QWWRDSRTFQHKENSAGNTPSEKFYTWKKLAEFVRNGLKMNAQKVFIPVE
TIIRIPTPTGFPFVYNMTSLLMHKMENFVQTKTPSLLDIPSFFFKTQEFK
GDLIHKQRSLLFARGSVYFESPIATAGFHHNKTLNISFDAQLSMKANIAR
MEYTTDLELPKQPEMVTIDNGIEMFVQHHIDAENKKTEFTYKGMPVPFHS
DSHKFVQDKDDAKSPKTDFSKLAPTMFLKLKGKKDQQKQKVSKYLVTRSN
GDITISENSPQVWRMIPTNGNTRVVTLMAPGKGFINIDKRTKRIRMSKEK
KTYFIVDFVSEGIQLKTVLPTDQVSQPKDNLKDMMKNITNMVNHYRKAGL
NLDEIENAQKMIDEMTCESNCVDVYHFYYDETQRRWRPTKESEQLTTTFI
AEIQKTSKHHYQNELYKSSKCYWTFPIPYCLSGIISKDGDQAVMTTKQFF
KPMIQKFKLHHDVEKIQMKLEPSGNDDNRKYTFTVTSENSDKKFEMVWQH
DKKLRQFEFDVYPDVTESRDRFMCMKMKYPENTLDMSVSFDKKCQEQHFK
LTNLDKSGKARLSTYSMDFDWMVKFDDSIPVSTKFIPRSKWFYRQLKKFT
QDDEIDEDDYDETTRGENKRMRSVKGDGYVSLISANQIRVRVNNSKHGFE
KIFRVPTYLDRMPFGSKSYTFIGQMSDKIDRSVCIHKGNQFRTFDQVVYQ
YDTKKTKCEYTLMKTYTKDVSNIEVYVNNLDKEMKQMRIIYGDSEIQIKP
KNTNQIPEVLVNGRRQRITASSLSRDGNKVTLANGGVIDFVWIPETKALF
FFTKEMGIEIYAGGRAVHIRMSRFMSGKIHGMCGDMNSEQDLEMRAPEMV
EVEDVTLFGLSWIVNGKKCTSSGCQFQRKDFQRLRRTNNRETWSCTTLVA
LPQCFSGCYPKKTTTLQNVPVKCTGRDRNTVQRMMDVSATTECQCSC Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005319 | lipid transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006869 | lipid transport |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006869 |
lipid transport |
| molecular_function |
GO:0005319 |
lipid transporter activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 1078..1098 |
| None | No IPR available | GENE3D | 1.25.10.20 | | coord: 318..646
e-value: 1.1E-20
score: 73.5 |
| None | No IPR available | GENE3D | 2.20.80.10 | | coord: 780..931
e-value: 4.5E-7
score: 29.0 |
| IPR015255 | Vitellinogen, open beta-sheet | SMART | SM01169 | DUF1943_3 | coord: 663..927
e-value: 5.0E-5
score: 10.5 |
| IPR015255 | Vitellinogen, open beta-sheet | PFAM | PF09172 | DUF1943 | coord: 672..914
e-value: 5.6E-15
score: 55.3 |
| IPR001846 | von Willebrand factor, type D domain | SMART | SM00216 | VWD_2 | coord: 1423..1599
e-value: 2.0E-7
score: 40.6 |
| IPR001846 | von Willebrand factor, type D domain | PFAM | PF00094 | VWD | coord: 1434..1598
e-value: 1.2E-11
score: 45.0 |
| IPR001846 | von Willebrand factor, type D domain | PROSITE | PS51233 | VWFD | coord: 1432..1648
score: 23.493 |
| IPR001747 | Lipid transport protein, N-terminal | SMART | SM00638 | lpd_n | coord: 37..617
e-value: 1.4E-9
score: -55.2 |
| IPR001747 | Lipid transport protein, N-terminal | PFAM | PF01347 | Vitellogenin_N | coord: 42..612
e-value: 1.5E-41
score: 142.4 |
| IPR001747 | Lipid transport protein, N-terminal | PROSITE | PS51211 | VITELLOGENIN | coord: 37..693
score: 17.295 |
| IPR015816 | Vitellinogen, beta-sheet N-terminal | GENE3D | 2.30.230.10 | | coord: 40..301
e-value: 6.0E-40
score: 136.7 |
| IPR015817 | Vitellinogen, open beta-sheet, subdomain 1 | GENE3D | 2.20.50.20 | | coord: 663..779
e-value: 3.1E-7
score: 30.0 |
| IPR015819 | Lipid transport protein, beta-sheet shell | SUPERFAMILY | 56968 | Lipovitellin-phosvitin complex; beta-sheet shell regions | coord: 42..296 |
| IPR015819 | Lipid transport protein, beta-sheet shell | SUPERFAMILY | 56968 | Lipovitellin-phosvitin complex; beta-sheet shell regions | coord: 676..939 |
| IPR011030 | Vitellinogen, superhelical | SUPERFAMILY | 48431 | Lipovitellin-phosvitin complex, superhelical domain | coord: 338..642 |
Blast
The following BLAST results are available for this feature:
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