TCONS_00014172-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014172-protein
Unique NameTCONS_00014172-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length195

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014172-protein ID=TCONS_00014172-protein|Name=TCONS_00014172-protein|organism=Clytia hemisphaerica|type=polypeptide|length=195bp
VKPTVSLRTTSSEKEQQKKGPKRPTTTTTTTTTTTTVPPTYASRNDATCG
YNTLSKQISAFIVGGEISSRGKWPWLAAIYLYGEHHCGATLIHPQYLVTA
AHCVFDGGFYKEKEDMHIVLNDFKRNIDESGEQVIQVEKYWVHPQYAKAY
TIQFEHDIAVIKLKEPAKLSNTSVNTACLPQRNEKIPLNSKCFIT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007936XLOC_007936Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014172TCONS_00014172Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR018114TRYPSIN_HIS
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 88..103
score: 49.43
coord: 153..167
score: 35.64
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 61..195
e-value: 6.8E-6
score: 2.9
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 62..195
e-value: 3.2E-27
score: 95.7
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 62..195
score: 16.491
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 62..195
e-value: 6.87104E-41
score: 138.949
NoneNo IPR availableGENE3D2.40.10.10coord: 62..96
e-value: 4.3E-18
score: 64.7
NoneNo IPR availableGENE3D2.40.10.10coord: 97..195
e-value: 2.1E-25
score: 89.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 98..103
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 32..195

Blast
[Close]
BLAST of TCONS_00014172-protein vs. Swiss-Prot (Human)
Match: PRS42 (Serine protease 42 OS=Homo sapiens GN=PRSS42 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.176e-18
Identity = 42/146 (28.77%), Postives = 79/146 (54.11%), Query Frame = 0 
Query:   50 GYNTLSKQISAFIVGGEISSRGKWPWLAAIYLYGEHHCGATLIHPQYLVTAAHCVFDGGFYKEKEDMHIVLNDFKRNIDESGEQVIQVEKYWVHPQYAKAYTIQFEHDIAVIKLKEPAKLSNTSVNTACLPQRNEKIPLNSKCFIT 195
            G + L  +    IVGG  +  G+WPW  ++   G H CG TL+   +++TA HC+     Y  K     V N       E+   V+ V++ +VHP+++   TI+  +D+A+++L+ P   + +++   C+PQ N ++   ++C++T
Sbjct:   68 GDSLLCGRTPLRIVGGVDAEEGRWPWQVSVRTKGRHICGGTLVTATWVLTAGHCISSRFHYSVKMGDRSVYN-------ENTSVVVSVQRAFVHPKFSTVTTIR--NDLALLQLQHPVNFT-SNIQPICIPQENFQVEGRTRCWVT 203
The following BLAST results are available for this feature:
BLAST of TCONS_00014172-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRS421.176e-1828.77Serine protease 42 OS=Homo sapiens GN=PRSS42 PE=1 ... [more]
back to top