TCONS_00014109-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014109-protein
Unique NameTCONS_00014109-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length192

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014109-protein ID=TCONS_00014109-protein|Name=TCONS_00014109-protein|organism=Clytia hemisphaerica|type=polypeptide|length=192bp
FLLYMTKKSNKTTMIDQYSLLVGLGFGFVIGYFIFKKEKSSVEVESKDID
YSAQTFDEFKMILVVRQDLGMGKGKIAAQCCHAAVDVYNKAKKKHPQWVK
TWEQVGCQKVALKCPDEETMIALQTHAASLGLDARIIXRIALQTHAASLG
LDARIIQDAGRTQIPSGSRTVLGIGPAPFELVDKVTGHLKLL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007903XLOC_007903Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014109TCONS_00014109Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002833PTH2
IPR023476Pep_tRNA_hydro_II_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004045aminoacyl-tRNA hydrolase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004045 aminoacyl-tRNA hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002833Peptidyl-tRNA hydrolase, PTH2TIGRFAMTIGR00283TIGR00283coord: 60..138
e-value: 6.8E-26
score: 88.8
IPR002833Peptidyl-tRNA hydrolase, PTH2PFAMPF01981PTH2coord: 60..192
e-value: 4.5E-44
score: 149.4
IPR023476Peptidyl-tRNA hydrolase II domainGENE3D3.40.1490.10coord: 54..192
e-value: 2.5E-45
score: 152.9
IPR023476Peptidyl-tRNA hydrolase II domainSUPERFAMILY102462Peptidyl-tRNA hydrolase IIcoord: 57..192
NoneNo IPR availableCDDcd02430PTH2coord: 59..192
e-value: 1.27714E-57
score: 178.101

Blast
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BLAST of TCONS_00014109-protein vs. Swiss-Prot (Human)
Match: PTH2 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens GN=PTRH2 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 4.296e-45
Identity = 82/173 (47.40%), Postives = 104/173 (60.12%), Query Frame = 0 
Query:   24 LGFGFVIGYFIFKKEKSS-----VEVESKDIDYSAQTFDEFKMILVVRQDLGMGKGKIAAQCCHAAVDVYNKAKKKHPQWVKTWEQVGCQKVALKCPDEETMIALQTHAASLGLDARIIXRIALQTHAASLGLDARIIQDAGRTQIPSGSRTVLGIGPAPFELVDKVTGHLKL 191
            LG+   + + +  K K+S      E E+  +  S     E+KMILVVR DL MGKGK+AAQC HAAV  Y + ++++P+ +K WE  G  KV +K PDEET+I                   AL  HA  LGL   +IQDAGRTQI  GS+TVLGIGP P +L+DKVTGHLKL
Sbjct:   29 LGWSLRVCFGMLPKSKTSKTHTDTESEASILGDSG----EYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPEMLKQWEYCGQPKVVVKAPDEETLI-------------------ALLAHAKMLGLTVSLIQDAGRTQIAPGSQTVLGIGPGPADLIDKVTGHLKL 178
The following BLAST results are available for this feature:
BLAST of TCONS_00014109-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTH24.296e-4547.40Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo s... [more]
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