TCONS_00014043-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014043-protein
Unique NameTCONS_00014043-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length628

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014043-protein ID=TCONS_00014043-protein|Name=TCONS_00014043-protein|organism=Clytia hemisphaerica|type=polypeptide|length=628bp
MAEQSQEISQQPQQQNPLTRKLKKILNTRLDNDKELVDALKALSSFFGEN
TLRARRNLRGDVEKRSLEISEQFESQFKEVKTKLDEISTDIMSMNKCCVE
MMDRLKNSKESTADLISKTTHLQNERKELELKGTIADAFLDRFQLTQNEI
KALRASKENVVSEEYFNALARCKQIHQDCRLLLRSKQQTAGLEIMESMAL
YQETAYEKLYRWAQEECRSMTNDMPDISGALCKSIEALQDRQVLLRYTLD
ELGAARRTAVVRCFIDALTRGGAGGTPRPIELYSHDPVRYVGDILAWLHQ
AVAGEKELLQSLLRRTNIKEHKPMILEVLNHIMEGICQPFKVRVEQVITS
DPGASILFKLGNLMKFYGETLANLFENETSTIVTCIEEMHHLSQQMFFNN
LSFHGSKLVEKMDLPPPDLSPSQVVNETLSLLKEVLSSHDTAVSSVSEQQ
SAYEKIMNCLLDPLLQCCMVAANRMNSADSATYMINCLHNVETCLGVFEF
TDVKLDVLSTQIAIHVETLAKEQVEFILERSTLATLCEATKNLGETIDQQ
TVKSTMGMFDQFLANPDSLNLPQLELLRATRLRESIRSKGLRSIEETYGE
LYQSLTTTFNIPTNLITRTPEHIKQLLS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007855XLOC_007855Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014043TCONS_00014043Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010490COG6
Vocabulary: Biological Process
TermDefinition
GO:0006891intra-Golgi vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0017119Golgi transport complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
cellular_component GO:0017119 Golgi transport complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010490Conserved oligomeric Golgi complex subunit 6SMARTSM01087COG6_2coord: 38..627
e-value: 2.5E-216
score: 734.7
NoneNo IPR availablePFAMPF06419COG6coord: 39..627
e-value: 1.0E-180
score: 601.9

Blast
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BLAST of TCONS_00014043-protein vs. Swiss-Prot (Human)
Match: COG6 (Conserved oligomeric Golgi complex subunit 6 OS=Homo sapiens GN=COG6 PE=1 SV=2)

HSP 1 Score: 686.411 bits (1770), Expect = 0.000e+0
Identity = 322/626 (51.44%), Postives = 460/626 (73.48%), Query Frame = 0 
Query:   16 NPLTRKLKKILNTRLDNDKELVDALKALSSFFGENTLRARRNLRGDVEKRSLEISEQFESQFKEVKTKLDEISTDIMSMNKCCVEMMDRLKNSKESTADLISKTTHLQNERKELELKGTIADAFLDRFQLTQNEIKALRASKENVVSEEYFNALARCKQIHQDCRLLLRSKQQTAGLEIMESMALYQETAYEKLYRWAQEECRSMTNDMPDISGALCKSIEALQDRQVLLRYTLDELGAARRTAVVRCFIDALTRGGAGGTPRPIELYSHDPVRYVGDILAWLHQAVAGEKELLQSLLRRTNIKEHKPMILEVLNHIMEGICQPFKVRVEQVITSDPGASILFKLGNLMKFYGETLANLFENETSTIVTCIEEMHHLSQQMFFNNLSFHGSKLVEKMDLPPPDLSPSQVVNETLSLLKEVLSSHDTAVSSVSEQQSAYEKIMNCLLDPLLQCCMVAANRMNSADSATYMINCLHNVETCLGVFEFTDVKLDVLSTQIAIHVETLAKEQVEFILERSTLATLCEATK----------NLGETIDQQTVKSTMGMFDQFLANPDSLNLPQLELLRATRLRESIRSKGLRSIEETYGELYQSLTTTFN---IPTNLITRTPEHIKQLLS 628
            NPL+RKL KIL TRLDNDKE+++ALKALS+FF EN+LR RRNLRGD+E++SL I+E+F S FKEVK +L+ IS D+ +M+ CC +M  RL+ +KE T DLI KTT LQ+E ++LE++  +ADAFL +FQLT +E+  LR ++E  ++E++F AL R KQIH D ++LLR+ QQTAGLEIME MAL QETAYE+LYRWAQ ECR++T +  D+S  L +++EALQDR VL +YTLDE G ARR+ VVR FIDALTRGG GGTPRPIE++SHDP+RYVGD+LAWLHQA A EKE L++LL+    +  +  I EV+ HI EG+C+P KVR+EQVI ++PGA +L+K+ NL+KFY  T++ +  N  + ++T IEEMH LS+++FFN+LS H SKL++K++LPPPDL PS  +N+TL LL+EVL+SHD++V  +  +Q+ + ++++C+LDPLLQ C V+A+ + +AD AT+M+N L+ ++T L +FEFTD +L++L  QI  H++TL  EQ  ++L R  L+ +    +          N+   +D  T+K+ M  FD++L+ PD+L +PQL  L +  ++E I  +    +   YGE+Y ++    N    P N++ R+P+ ++ LLS
Sbjct:   33 NPLSRKLHKILETRLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKFQLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQMALLQETAYERLYRWAQSECRTLTQESCDVSPVLTQAMEALQDRPVLYKYTLDEFGTARRSTVVRGFIDALTRGGPGGTPRPIEMHSHDPLRYVGDMLAWLHQATASEKEHLEALLKHVTTQGVEENIQEVVGHITEGVCRPLKVRIEQVIVAEPGAVLLYKISNLLKFYHHTISGIVGNSATALLTTIEEMHLLSKKIFFNSLSLHASKLMDKVELPPPDLGPSSALNQTLMLLREVLASHDSSVVPLDARQADFVQVLSCVLDPLLQMCTVSASNLGTADMATFMVNSLYMMKTTLALFEFTDRRLEMLQFQIEAHLDTLINEQASYVLTRVGLSYIYNTVQQHKPEQGSLANM-PNLDSVTLKAAMVQFDRYLSAPDNLLIPQLNFLLSATVKEQIVKQSTELVCRAYGEVYAAVMNPINEYKDPENILHRSPQQVQTLLS 657
The following BLAST results are available for this feature:
BLAST of TCONS_00014043-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
COG60.000e+051.44Conserved oligomeric Golgi complex subunit 6 OS=Ho... [more]
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