TCONS_00013862-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013862-protein
Unique NameTCONS_00013862-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length110

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013862-protein ID=TCONS_00013862-protein|Name=TCONS_00013862-protein|organism=Clytia hemisphaerica|type=polypeptide|length=110bp
MSNIFNNQFDPTEDTEDEFGGKLSQNKVHIRIQQRNGRKTITTLQGIEDK
YDQKKLAKAFKKEFNCNGTVVEDEQYGEVIQLSGDQRANIQQFLVDVGIC
KKDHLVVHGF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007742XLOC_007742Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013862TCONS_00013862Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001950SUI1
IPR005874SUI1_euk
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006413 translational initiation
molecular_function GO:0003743 translation initiation factor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001950SUI1 domainPFAMPF01253SUI1coord: 25..99
e-value: 4.7E-25
score: 87.8
IPR001950SUI1 domainGENE3D3.30.780.10coord: 11..110
e-value: 7.9E-36
score: 122.0
IPR001950SUI1 domainPROSITEPS50296SUI1coord: 28..98
score: 23.59
IPR001950SUI1 domainSUPERFAMILY55159eIF1-likecoord: 20..110
IPR005874Eukaryotic translation initiation factor SUI1TIGRFAMTIGR01160TIGR01160coord: 7..110
e-value: 5.0E-43
score: 144.1
IPR005874Eukaryotic translation initiation factor SUI1PIRSFPIRSF004499Transl_init_SUI1_Eukcoord: 1..110
e-value: 1.8E-44
score: 148.6
IPR005874Eukaryotic translation initiation factor SUI1CDDcd11566eIF1_SUI1coord: 26..109
e-value: 5.33276E-46
score: 144.215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20

Blast
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BLAST of TCONS_00013862-protein vs. Swiss-Prot (Human)
Match: EIF1 (Eukaryotic translation initiation factor 1 OS=Homo sapiens GN=EIF1 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.493e-35
Identity = 69/113 (61.06%), Postives = 84/113 (74.34%), Query Frame = 0 
Query:    1 MSNIFN-NQFDPTEDTE--DEFGGKLSQNKVHIRIQQRNGRKTITTLQGIEDKYDQKKLAKAFKKEFNCNGTVVEDEQYGEVIQLSGDQRANIQQFLVDVGICKKDHLVVHGF 110
            MS I N + FDP  D    D+     +++ +HIRIQQRNGRKT+TT+QGI D YD+KKL KAFKK+F CNGTV+E  +YGEVIQL GDQR NI QFLV++G+ K D L VHGF
Sbjct:    1 MSAIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
The following BLAST results are available for this feature:
BLAST of TCONS_00013862-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EIF14.493e-3561.06Eukaryotic translation initiation factor 1 OS=Homo... [more]
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