TCONS_00013829-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013829-protein
Unique NameTCONS_00013829-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length266

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013829-protein ID=TCONS_00013829-protein|Name=TCONS_00013829-protein|organism=Clytia hemisphaerica|type=polypeptide|length=266bp
MNVKVEELYQKWSETDLFFQELETPFYGIRILRQDPVENLFSFICSQNNN
ISRISQLVEKLAEHYGDHIATFEGTKYYSFPTMEALSKTGVEENLRKLGF
GYRAKFIQKVAETVCGKENSVDWLFELRAKPYKEAHSALCTLYGVGPKVA
DCVCLMSLDKHDAIPVDTHMWQVAANQYLPHLKKNKNITDKAYKEIGDFF
RQQFGEYAGWAQSVLFSSDLKKFESLKEEGKKKIAKRRHYEASDGVKKTK
STKGAGKKKPAKKKKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007729XLOC_007729Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013829TCONS_00013829Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003265HhH-GPD_domain
IPR023170HTH_base_excis_C
IPR012904OGG_N
IPR011257DNA_glycosylase
Vocabulary: Biological Process
TermDefinition
GO:0006284base-excision repair
GO:0006289nucleotide-excision repair
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0008534oxidized purine nucleobase lesion DNA N-glycosylase activity
GO:0003684damaged DNA binding
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006284 base-excision repair
biological_process GO:0006281 DNA repair
biological_process GO:0006289 nucleotide-excision repair
molecular_function GO:0003824 catalytic activity
molecular_function GO:0003684 damaged DNA binding
molecular_function GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003265HhH-GPD domainSMARTSM00478endo3endcoord: 45..213
e-value: 3.9E-17
score: 72.9
IPR003265HhH-GPD domainPFAMPF00730HhH-GPDcoord: 42..195
e-value: 1.1E-15
score: 57.9
IPR003265HhH-GPD domainCDDcd00056ENDO3ccoord: 38..196
e-value: 1.70474E-28
score: 106.172
NoneNo IPR availableGENE3D1.10.340.30coord: 35..155
e-value: 8.7E-40
score: 135.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..266
IPR023170Helix-turn-helix, base-excision DNA repair, C-terminalGENE3D1.10.1670.10coord: 156..220
e-value: 3.9E-23
score: 81.2
IPR0129048-oxoguanine DNA glycosylase, N-terminalPFAMPF07934OGG_Ncoord: 2..40
e-value: 1.3E-8
score: 34.8
IPR011257DNA glycosylaseSUPERFAMILY48150DNA-glycosylasecoord: 35..219

Blast
[Close]
BLAST of TCONS_00013829-protein vs. Swiss-Prot (Human)
Match: OGG1 (N-glycosylase/DNA lyase OS=Homo sapiens GN=OGG1 PE=1 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 8.627e-81
Identity = 109/235 (46.38%), Postives = 156/235 (66.38%), Query Frame = 0 
Query:    1 MNVKVEELYQKWSETDLFFQELETPFYGIRILRQDPVENLFSFICSQNNNISRISQLVEKLAEHYGDHIATFEGTKYYSFPTMEALSKTGVEENLRKLGFGYRAKFIQKVAETVCGKENSVDWLFELRAKPYKEAHSALCTLYGVGPKVADCVCLMSLDKHDAIPVDTHMWQVAANQYL--PHLKKNKNITDKAYKEIGDFFRQQFGEYAGWAQSVLFSSDLKKFESLKEEGKKK 233
            ++V + +LY  W   D  FQE+   F G+R+LRQDP+E LFSFICS NNNI+RI+ +VE+L + +G  +   +   Y+ FP+++AL+   VE +LRKLG GYRA+++   A  +  ++  + WL +LR   Y+EAH ALC L GVG KVADC+CLM+LDK  A+PVD HMW +A   Y   P   + K  + +  KE+G+FFR  +G YAGWAQ+VLFS+DL++    +E   K+
Sbjct:  102 LDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQSRHAQEPPAKR 336
The following BLAST results are available for this feature:
BLAST of TCONS_00013829-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OGG18.627e-8146.38N-glycosylase/DNA lyase OS=Homo sapiens GN=OGG1 PE... [more]
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