TCONS_00013776-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00013776-protein
Unique Name	TCONS_00013776-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	503

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00013776-protein ID=TCONS_00013776-protein|Name=TCONS_00013776-protein|organism=Clytia hemisphaerica|type=polypeptide|length=503bp
MVTVLNTSTLAEVFHGFPHLDFNFQNTTTVFSPTNIAYQQALMFNGIYLF
FMTTCLFLIFGFYFLVASCYFYCNCNTQILKPRPSKSKCLRILIGIFAVL
SCAALGLSFYGNNKAKDGIEDATEAMQSIYNQFDLYKFKNNDVIQESIRN
AKQQVLELQQKVTFNHSQELESIEKHLLAASIDLKLSGNLLEVVGVDLQT
YAEECTKYDDLRWWIFTTFLCFHLLLVLVILYATYTNRKCALIGLTVMAV
FSLFLNMSIISISSPLSIGAADICLQPKQAYLQYVQDNASAQALIEYYMD
CSVADNELFKDFNKTSDELSEAYMLVQAFQLLPIVRDLPEVKLLLKFTRE
AIGELNHLIDIVHCKTIHDDYQNLLQAVCNTTIEGFGLMILSCFIIVVFL
IAIMLCITPLWKATAPLKPILKKYGVHIITESYQGPPGYGVAGSESFHGS
SSFDASYKSIDDPEDFEHLPLINKRNQPHSYRAVHGSTEFLSVEEERRDK
TTL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007693	XLOC_007693	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00013776	TCONS_00013776	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006990	Tweety

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 141..161
IPR006990	Tweety	PFAM	PF04906	Tweety	coord: 24..413 e-value: 1.6E-43 score: 148.8

Blast

[Close]

BLAST of TCONS_00013776-protein vs. Swiss-Prot (Human)
Match: TTYH3 (Protein tweety homolog 3 OS=Homo sapiens GN=TTYH3 PE=1 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 1.277e-26
Identity = 123/546 (22.53%), Postives = 221/546 (40.48%), Query Frame = 0

Query:   13 VFHGFPHLDFNFQNTTTVFSPTNIAYQQALMFNGIYLFFMTTCLFLIFGFYFLVASCYFYCNCNTQILKPRPSKSKCLRILIGIFAVLSCAA-LGLSFYGNNKAKDGIEDATEAMQSIYNQFDLYKFKNNDVIQESIRNAKQQVLELQQKV-----TFNHSQE--LESIEKHLLAASIDLK----LSGNLLEVVG------------VDLQTYAEECTKYDDLRWWIFTTFLCFHLLLVLVILYATYTNRKCALIGLTVMAVFSLFLNMSIISISSPLSIGAADICLQPKQAYLQYVQD-NASAQALIEYYMDCSV-ADNELFKDFNKTSDELSEAYMLVQAFQLLPIVRDLPEVKLLLKFTREAIG----ELNHLIDIVHCKTIHDDYQNLLQAVCNTTIEGFGLMILSCFIIVVFLIAIMLCITPLWK-------------ATAPLKPILKKYGVHIITESYQGPPGYGVAGSESFHGSSSFDASYKSIDDPEDFEHL--------------PLINKRNQPHSYRAVHGSTEFLSVEEERRDKT 501
            + H  PH D +++ T++ F P +  YQQAL+  G           L   FY       F+  C  +  +       C      I A L C+A + + FYGN +  DGI  AT                       S+R+A + V  +Q +V       NH+ E  L+++E+ L      L+    L G L  ++G            V L+  AE+   YD  RW  +   L   +++ L++L     + K  L+G+ ++ V +L ++   + +   +S+G++D C+ P     + V++ +  +  +++YY+ CS  A N   +  + +   L E   +V    L  +  + P  K  L   +E +      L HL  +V C+++H DY   L   C   +EG   + L  F+  +   +I+  +   W+             A  P +     Y VH+        P     GS S+   +S  A+  ++ +    E++              PLI + + P SY +     ++L+  + R D +
Sbjct:   14 LLHRLPHFDLSWEATSSQFRPEDTDYQQALLLLGAAALACLALDLLFLLFY------SFWLCCRRRKSEEHLDADCCCTAWCVIIATLVCSAGIAVGFYGNGETSDGIHRATY----------------------SLRHANRTVAGVQDRVWDTAVGLNHTAEPSLQTLERQLAGRPEPLRAVQRLQGLLETLLGYTAAIPFWRNTAVSLEVLAEQVDLYDWYRWLGYLGLLLLDVIICLLVLVGLIRSSKGILVGVCLLGVLALVISWGALGLELAVSVGSSDFCVDPDAYVTKMVEEYSVLSGDILQYYLACSPRAANPFQQKLSGSHKALVEMQDVVAEL-LRTVPWEQPATKDPLLRVQEVLNGTEVNLQHLTALVDCRSLHLDYVQALTGFCYDGVEGLIYLALFSFVTALMFSSIVCSVPHTWQQKRGPDEDGEEEAAPGPRQAHDSLYRVHM--------PSLYSCGS-SYGSETSIPAAAHTVSNAPVTEYMSQNANFQNPRCENTPLIGRESPPPSYTSSM-RAKYLATSQPRPDSS 520

The following BLAST results are available for this feature:

BLAST of TCONS_00013776-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00013776-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TTYH3	1.277e-26	22.53	Protein tweety homolog 3 OS=Homo sapiens GN=TTYH3 ...	[more]

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TCONS_00013776-protein (polypeptide) - C. hemisphaerica