TCONS_00013695-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00013695-protein
Unique Name	TCONS_00013695-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	551

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00013695-protein ID=TCONS_00013695-protein|Name=TCONS_00013695-protein|organism=Clytia hemisphaerica|type=polypeptide|length=551bp
MAIFLALLLVFSVFDHTIAIEKTWIHTTLWNDVLNWQPPHLPCADGTVHL
SDGVVFISNITLPSEIILSSNSEIIFDANSEIPLGKPVNAAPDTSNPNCG
KNFLPVQHSWHNPLNWKSGDERDTGIPYIERVPCHEDDVVFPEHNSFVAK
MSRSVSVNSVQLRGKKLTENAELQSYLSSEDEKDNFIYENNAKLSVQSDS
CPKAGCICEGYTDKTYNQMVCDSFQCPKINCPNLKVKPTGDCCAHCGCTV
DFKFNSGFDLEKCQQALMNYTAHISRTEFDKVQILLSDSQQRSVTNEMVD
EISRLLQQQGHPCMAKSKSVIKGICSGGKGSQSANENAGTIAMSVVIPII
ALTILIIILVVVYRRHRRIASQREHKEFKNPDDIMEYPGMDQVDMRTTDF
MSPYDHIVEVKSKEDGAQSFSNPSYAGNDFEDGQDENFNQSVVDINFSNF
VNDPNSNEMKDANMFKTSSFGNPLYDAVIDDKKPPQNENEEEEINHHGNE
AVLQNEADDENQDKEADTNVGVEANVGDGSGGLDNPLYSEVFAAFSEKDE
E

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007652	XLOC_007652	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00013695	TCONS_00013695	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR026112	AMN

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.5.100		coord: 328..371 e-value: 2.0E-4 score: 20.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 415..435
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 478..537
IPR026112	Amnionless	PFAM	PF14828	Amnionless	coord: 22..476 e-value: 3.4E-52 score: 177.7

Blast

[Close]

BLAST of TCONS_00013695-protein vs. Swiss-Prot (Human)
Match: AMNLS (Protein amnionless OS=Homo sapiens GN=AMN PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 4.348e-27
Identity = 89/334 (26.65%), Postives = 149/334 (44.61%), Query Frame = 0

Query:    1 MAIFLALLLVFSVFDHTIAIEKTWIHTTLWNDVLNWQPPHLPCADGTVHL-SDGVV--------FISNITLP--SEIILSSNSEI-IFDANSEIPLGKPVNAAPDTSNPNCGKNFLPVQHSWHNPLNWKSGDERDTGIPYI--ERVPCHEDDVVFPEHNSFVAKM---SRSVSVNSVQLRGKKLTENAELQSYLSSEDEKDNFIYENNAKLSVQSDSCP-KAGCICEGYTDKTYNQMVCDSF------QCPKINCPNLKVKPTGDCCAHCGCTVDFKFNSGFDLEKCQQALMNYTAHISRTEFDKVQILLSDSQQRSVTNEMVDEISRLLQQQG 310
            M +   +LL   +   T A+ K W+  T ++   NW     PCA G V   +D +V         +S++ LP   E++L+S +   + D  S +  G    A    S+          + SWH+P  W+SGDE   G+ ++  ERVPC  DDV FP   SF   +   +  V V S+   G+  T + +L  +L+S   +  F       LSV  + C   +GC+C     + +   +C +       +CP+  C +  ++P G CC  CG  V       FDLE+ +  +++    +   ++  +Q+ +S   + S   E   EI  +L + G
Sbjct:    1 MGVLGRVLLWLQLCALTQAVSKLWVPNTDFDVAANWSQNRTPCAGGAVEFPADKMVSVLVQEGHAVSDMLLPLDGELVLASGAGFGVSDVGSHLDCGAGEPAVFRDSD----------RFSWHDPHLWRSGDE-APGLFFVDAERVPCRHDDVFFPPSASFRVGLGPGASPVRVRSISALGRTFTRDEDLAVFLASRAGRLRF--HGPGALSVGPEDCADPSGCVCGNAEAQPW---ICAALLQPLGGRCPQAAC-HSALRPQGQCCDLCGAVVLLTHGPAFDLERYRARILD--TFLGLPQYHGLQVAVSKVPRSSRLREADTEIQVVLVENG 315

The following BLAST results are available for this feature:

BLAST of TCONS_00013695-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00013695-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AMNLS	4.348e-27	26.65	Protein amnionless OS=Homo sapiens GN=AMN PE=1 SV=...	[more]

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TCONS_00013695-protein (polypeptide) - C. hemisphaerica