TCONS_00013685-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013685-protein
Unique NameTCONS_00013685-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length614

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013685-protein ID=TCONS_00013685-protein|Name=TCONS_00013685-protein|organism=Clytia hemisphaerica|type=polypeptide|length=614bp
FTLKMDKPTTEILSLSLVREYLSRRGYRKTLHAFDKETQKKEQSITNRRT
LADQLNIWDLIKQNKKNGDKYQSFYELIVDFILRERKDLKKSSRDSTLKD
GSNTSLHDVKHSTPIRCNRTRQSHQNLKECQNDKNEEDRWLSDVLTGIQK
DKKVIEAKTKKNDSNNKESFNSFDSVDTKSSKKNVVSHQSAEILAEVHQS
FDKPSTSETVDSEFSLSFIEGIRKKKEKKQTVSLFDSLTIDDVDSTEHLS
HVTTHMTFDRSAKYHDDVKSITLETAIELKTLIFGNPKSSFNPEWRRQGF
YFSTHPDLEYGLMQEKGGPCGLLASVQAWILRYLLFNENGKQNGKVPLSL
TREEQEEALIKALTQILWRSKQPHDSQTVIAIPSKSPKFNASPSTYKADN
LTERLDLYECKEKVKLEMFLKKNLTLFQQKDGIVLFLYSVVLTYGIKNVK
NSTDDEKLTLIGCHGYCTQEMVNLMLVGRAVSNVFDGDKEFGQTLLHGIQ
SQSPIGFLSLFEHYGSCQVGDHYKNPIFPIWVVCSESHFSVLFTTDDVTK
NSTFDLFYFDGLGQQDEEIRLSITPDGLKKVLNDDIDLIPPLDSCIRTKW
KNALVSWNDTDPLL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007647XLOC_007647Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013685TCONS_00013685Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025257DUF4205
IPR006594LisH
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025257Domain of unknown function DUF4205SMARTSM01174DUF4205_3coord: 280..609
e-value: 3.0E-136
score: 468.6
IPR025257Domain of unknown function DUF4205PFAMPF13898DUF4205coord: 280..609
e-value: 1.2E-111
score: 372.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..177
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 10..42
score: 8.568

Blast
[Close]
BLAST of TCONS_00013685-protein vs. Swiss-Prot (Human)
Match: MINY4 (Probable ubiquitin carboxyl-terminal hydrolase MINDY-4 OS=Homo sapiens GN=MINDY4 PE=1 SV=2)

HSP 1 Score: 291.197 bits (744), Expect = 1.123e-88
Identity = 159/358 (44.41%), Postives = 217/358 (60.61%), Query Frame = 0 
Query:  269 KSITLETAIELKTLIFGNPKSSFNPEWRRQGFYFSTHPDLEYGLMQEKGGPCGLLASVQAWILRYLLFNENGKQNGKVPLSLTREEQEEALIKALTQILWRSKQPHDSQTVIAIPSKSPKFNASPSTYKADNLTERLDLYECKEKVKLEMFLKKNLTLFQQKD-GIVLFLYSVVLTYGIKNVKNSTDDEKLTLIGCHGYCTQEMVNLMLVGRAVSNVFDGDKEFGQ-----TLLHGIQSQSPIGFLSLFEHYGSCQVGDHYKNPIFPIWVVCSESHFSVLFTTD-----DVTKNSTFDLFYFDGLGQQDEEIRLSITPDGLKKVLND-DIDLIPPLDSCIRTKWKNALVSWNDTDPLL 614
            K I L  A E+KTL+FG+    FN EW+ Q F FS    L+YG++Q KGGPCG+LA+VQ  +L+ LLF  + K +    L  +   +   L+ AL  I+WR+      + V+A+ S++ +F+ +   YKAD + E L L+       L  FL++++  F+    G +L   S +L+   + ++   D     LIG HGYCTQE+VNL+L G+AVSNVF+   E        TLL GI ++S IGFLSLFEHY  CQVG   K P FPIWVVCSESHFS+LF+       D      FDL+Y+DGL  Q E+IRL+I  D  + +  D D DL+PPL+ CIRTKWK A V+WN +DP+L
Sbjct:  405 KPIDLSVAKEIKTLLFGSSFCCFNEEWKLQSFSFSNTASLKYGIVQNKGGPCGVLAAVQGCVLQKLLFEGDSKADCAQGLQPSDAHRTRCLVLALADIVWRAG--GRERAVVALASRTQQFSPT-GKYKADGVLETLTLHSLTCYEDLVTFLQQSIHQFEVGPYGCILLTLSAILSRSTELIRQDFDVPTSHLIGAHGYCTQELVNLLLTGKAVSNVFNDVVELDSGDGNITLLRGIAARSDIGFLSLFEHYNMCQVGCFLKTPRFPIWVVCSESHFSILFSLQPGLLRDWRTERLFDLYYYDGLANQQEQIRLTI--DTTQTISEDTDNDLVPPLELCIRTKWKGASVNWNGSDPIL 757
The following BLAST results are available for this feature:
BLAST of TCONS_00013685-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MINY41.123e-8844.41Probable ubiquitin carboxyl-terminal hydrolase MIN... [more]
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