TCONS_00013674-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013674-protein
Unique NameTCONS_00013674-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length734

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013674-protein ID=TCONS_00013674-protein|Name=TCONS_00013674-protein|organism=Clytia hemisphaerica|type=polypeptide|length=734bp
MNHRRLRQILDQNIISLVHHDQNVSVSLEELVIDIMDDSASMMKQVVPHR
YCADMVYALFNIMNENTPRFPRVAGNAAFILGSLLEDENGRRKVQQLLLE
EKHQDDTSYLLPSLTALIQTQDQEAMTNASGTLSLLLESAEGREWALNQP
SMEWMVFILSECLLQDYRDLCVASNCALSLARVCMSPKGQELVLQHKDSE
HILKRLMESCTIDREGRGMNAAFALAYLCESEEGTKTITDFKECIDLQLA
MINMLRSVDDGCRKNAVFCLKNISNWKNGQDSLNQDLDIEQMLSALCNLL
SCGDESLGRMAAVTLTNLASRREGYMLQKDRSKAKVVLQHVLSQMVISDA
YRQDAFTAMKALMIPKPDAPTLKVLDAHCVSAEWEPVDAKSECQVFYELY
CDDKVVYTGNECAFTTRHLKEKTEYEFRLRAFTEDDEESFVSESVTVQTF
RAISSPPRNVRAVSVTANKVKIVWEKPNKICGNLKGYYIQEVQHNINYKP
TDMFFIASNLEADKEYHFEVCAVTQRGRGEVADLHVRTLRQDFFAPSKPK
IKMLSNREIVVSWKPPSAPAGRINGYELLQNGKSVYFGMKRYHICNVQPD
SKYKFSVVVWTNEGRNESVPCQKKIPKRQLKETKKQQKFDKEEDFVNWIE
ADGDDADEGDEPVSSRSIENGDHGNKGDALEAGEPDDEPLEPESGNLEND
EQQQKNDYFFASQGSRDHTHGDEVEEEEEEEEEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007641XLOC_007641Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013674TCONS_00013674Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR011989ARM-like
IPR013783Ig-like_fold
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 454..529
e-value: 9.7E-10
score: 48.4
coord: 367..439
e-value: 0.0013
score: 28.0
coord: 543..616
e-value: 0.0024
score: 27.1
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 455..530
e-value: 1.1E-7
score: 32.0
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 545..633
score: 12.986
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 456..542
score: 14.296
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 366..452
score: 11.669
IPR003961Fibronectin type IIICDDcd00063FN3coord: 545..620
e-value: 1.77563E-8
score: 51.7283
IPR003961Fibronectin type IIICDDcd00063FN3coord: 365..449
e-value: 1.24345E-7
score: 49.0319
IPR003961Fibronectin type IIICDDcd00063FN3coord: 455..538
e-value: 1.08199E-10
score: 58.2767
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 366..451
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 455..617
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 14..347
e-value: 1.2E-14
score: 53.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 443..535
e-value: 7.2E-16
score: 57.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 536..631
e-value: 1.0E-10
score: 41.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 355..442
e-value: 2.5E-11
score: 43.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 652..734
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 618..639
NoneNo IPR availableCDDcd00020ARMcoord: 191..320
e-value: 1.68263E-6
score: 45.7684
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 70..327

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013674-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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