TCONS_00013659-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013659-protein
Unique NameTCONS_00013659-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1307

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013659-protein ID=TCONS_00013659-protein|Name=TCONS_00013659-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1307bp
MSPKNGIYIVQGELNHIVAALRRNTRWTSGHFNQEEDEPLLQSFNQLKDT
LQNTSDINDLDVNVFLGPFLEVIRSEETTGPMTGVALSAVNKFLSYGLLD
PSCESASSGIDNLADAVTHARFVGTDPSSDEVVLMKILQVLRTLLLSPVG
VHMTNEAVCEIMQSCFRICFEMRLSELLRRTAEQTLIDMVQLLFLRLPQF
KEDLKGTMSEPHIRKMLRTGHLSRKGNRKQKQRTNSKVKKTSESPVAERK
KKDSTDGAPESEVTSKSKQDAKNTEAPTLSTSRSISVEDSVDSTSMSDSD
GKTLDQINPDIMKSIDESMDAIGVENSTSDGASTTDSLNIPENTQGGESD
QENKTDGGVVAKNSDAALGDLKDHGVVSIHYPEEDDARSLDSLDVSENTK
PASVKKVATPNDPSEDVNSEYVNPQGVRFTPQEESKEGQANIVPYGLPCV
RELLRFLSTLINPHDRHNTNAMVHIGLSLLTVALESGASHLGHFASLMTL
IKDDLCRNIFALLQCDIHILFSLSMRVCFLLFEALRGCLKFQLERYIIKL
SDILALDNLNVPYEKREMALEYMNQLFHIPCLVQEIYLNFDCDLHATNVL
EDMCKILSKNAFRPGNLSSVNLLALDALLSIINEIESHCISPNDSKTRQE
RTLSNSSEVTADESGTDDTHEDIVTPATSGYDIGRKLLSLGLYGIDEEKM
DGAQASKCFTSKQVPAPSAAEAAAKKKKKKALLIGIEEFNKKAKKGIEYL
QENGLMSTPFLPEELVHFMKENPNVDKKVIGDYIGDKRNPKVLEAFVKSF
ELKDVRVDEALRCFLEAFRLPGEAPVISLILEEFALRYFENNQSPYENQD
AVFTLAYAIIMLNVDQHNKNIKQQKPMQPEEFKRNLRKTNGSGDFPAELL
QAIYENIKNNEIVMPSERSGKVKEAYEWKLLLRRAEGPDGIYIPVTSSIY
DEELFLVLWGPTVAALSYIYENSVDKTNIQKTILGFRKCATISAFYNLSE
VFDNLLQSLCKFTSLLVTGEASDNLPVLFGGNLKAQLSARTAFALAHKYG
DIIHEGWHNLLICLLQLLKGKLLPTSLTEVEDFVDGKVSIIKEEPKPVTK
QDNSGMLSGILSYWTTSDTSSRSTLTAEDRKAQENAINCIKECRPESIIT
ESKFLRGESLQELVKALIISSKPEHSYESTDVPYDAEASVFFLEFLIEIA
LQNRDRISLLWQPLREHLSNIIISAPKVSFLVERAVVGLLRLAIRLIRRE
DISAQILITLRILLMMHPKVLLSCSKQISYGLHELVRTNASDIHYSRDWI
TILTILQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007634XLOC_007634Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013659TCONS_00013659Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000904Sec7_dom
IPR023394Sec7_alpha_orthog
IPR032691Sec7_N
Vocabulary: Biological Process
TermDefinition
GO:0032012regulation of ARF protein signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005086ARF guanyl-nucleotide exchange factor activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032012 regulation of ARF protein signal transduction
molecular_function GO:0005086 ARF guanyl-nucleotide exchange factor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000904Sec7 domainSMARTSM00222sec7_5coord: 725..912
e-value: 7.6E-70
score: 248.0
IPR000904Sec7 domainPFAMPF01369Sec7coord: 729..912
e-value: 6.7E-60
score: 201.9
IPR000904Sec7 domainPROSITEPS50190SEC7coord: 721..910
score: 35.749
IPR000904Sec7 domainSUPERFAMILY48425Sec7 domaincoord: 726..916
NoneNo IPR availableGENE3D1.10.220.20coord: 716..801
e-value: 7.3E-22
score: 76.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 397..420
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 643..675
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 324..360
NoneNo IPR availableCDDcd00171Sec7coord: 734..912
e-value: 2.09349E-62
score: 210.927
IPR023394Sec7 domain, alpha orthogonal bundleGENE3D1.10.1000.11coord: 802..922
e-value: 2.1E-38
score: 130.3
IPR032691Guanine nucleotide exchange factor, N-terminalPFAMPF12783Sec7_Ncoord: 449..599
e-value: 1.2E-23
score: 83.7

Blast
BLAST of TCONS_00013659-protein vs. Swiss-Prot (Human)
Match: GBF1 (Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 OS=Homo sapiens GN=GBF1 PE=1 SV=2)

HSP 1 Score: 1106.66 bits (2861), Expect = 0.000e+0
Identity = 631/1343 (46.98%), Postives = 873/1343 (65.00%), Query Frame = 0
Query:    1 MSPKNGIYIVQGELNHIVAALRRNTRWTSGHFNQEEDEPLLQSFNQLKDTLQNTSDINDLDVNVFLGPFLEVIRSEETTGPMTGVALSAVNKFLSYGLLDPSCESASSGIDNLADAVTHARFVGTDPSSDEVVLMKILQVLRTLLLSPVGVHMTNEAVCEIMQSCFRICFEMRLSELLRRTAEQTLIDMVQLLFLRLPQFKEDLKGTMSEPHIRKMLRTGHLSRKGNRKQKQRTN------SKVKKTSESPVAERKKKDS--TDGAPESEVTSKSKQDAKNTEAPTLSTSRSISVEDSVDSTSMSDSDGKTLDQINPDIMKSIDESMDAIGVENSTSDGASTTDSLNIPENTQGGESDQENKTDGGVVAKNSDAALGDLKDHGVVSIHYPEEDDARSLDSLDVSENTKPASVKKVATPNDPSEDVNSEYVNPQGVRFTPQEESKEGQANIVPYGLPCVRELLRFLSTLINPHDRHNTNAMVHIGLSLLTVALESGASHLGHFASLMTLIKDDLCRNIFALLQCDIHILFSLSMRVCFLLFEALRGCLKFQLERYIIKLSDILALDNLNVPYEKREMALEYMNQLFHIPCLVQEIYLNFDCDLHATNVLEDMCKILSKNAFR-PGNLSSVNLLALDALLSIINEIESHCISPN-DSKTRQER--TLSNSSEV---TADESGTDDTHEDIVT-------PATSGYDIGRKLLSLGLYGID--EEKMDGAQASKCFTSK----QVPAPSAAEAAAKKKKKKALLIGIEEFNKKAKKGIEYLQENGLMSTPFLPEELVHFMKENPNVDKKVIGDYIGDKRNPKVLEAFVKSFELKDVRVDEALRCFLEAFRLPGEAPVISLILEEFALRYFENNQSPYENQDAVFTLAYAIIMLNVDQHNKNI-KQQKPMQPEEFKRNLRKTNGSGDFPAELLQAIYENIKNNEIVMPSERSGKVKEAYEWKLLLRRAEGPDGIYIPVTSSIYDEELFLVLWGPTVAALSYIYENSVDKTNIQKTILGFRKCATISAFYNLSEVFDNLLQSLCKFTSLLVTGEASDNLPVLFGGNLKAQLSARTAFALAHKYGDIIHEGWHNLLICLLQLLKGKLLPTSLTEVEDFVD--GKVSIIKEEPKPVTKQDNSGMLSGILSY--WTTSDTSSRSTL---TAEDRKAQENAINCIKECRPESIITESKFLRGESLQELVKALIISSKPEHSYESTDVPYDAEASVFFLEFLIEIALQNRDRISLLWQPLREHLSNIIISAPKVSFLVERAVVGLLRLAIRLIRREDISAQILITLRILLMMHPKVLLSCSKQISYGLHELVRTNASDIHYSRDWITILTILQ 1307
            M  KN IYI+QGE+N +V A++RN RW++     EE +PLL SF  LK+ L + +++++++ NVFL PFLEVIRSE+TTGP+TG+AL++VNKFLSY L+DP+ E  + G++N+ADAVTHARFVGTDP+SDEVVLMKILQVLRTLLL+PVG H+TNE+VCEIMQSCFRICFEMRLSELLR++AE TL+DMVQLLF RLPQFKE+ K  +     +  +R G +S     K+++R+       +KV   SE P        S  T G P  +V +     +    +  +S S    +E S  +TS                        D   +E   S G ST      P +++ G  +Q +  +G  V K+  A++  +          PE           + E T PA     A+ +D       +YVNP+GVRFT Q   KEG A +VPYGLPC+REL RFL +L NPHDRHN+  M+H+GL LLTVALES    +    +L+ LIKD++CR++F LL  +   L++ S+RVCFLLFE++R  LKFQ+E YI KL +I+ ++N  +PYE +EMALE + QL+ IP  V E+Y+N+DCD + +N+ E++ K+LSKNAF   G L + +LL+LDALL++I+  E+HC +   +S T+QE+  T   S E+   T + S T+ T  D          P       GR     G  G    EE +D   A K F  K        P   E    K KKK L+ G E+FN+K KKGI++LQE GL++ P    E+  +++ENP +DKK+IG+++ D++N  +LE+FV +F  + +R+DEALR +LEAFRLPGEAPVI  +LE F  R+   N SP+ N DA F+LAYA+IMLN DQHN N+ KQ  PM  EEF++NL+  NG  DF  ++L+ +Y  IKN EIVMP E++G V+E Y W +LL R   P+GI++ V ++ YD +LF + WGPT+AALSY+++ S+++T IQK I GFRKCA ISA Y LS+VFDNL+ SLCKFT+L  + E+ +NLP +FG N KA ++A+T F LAH++GDI+ EGW N++  +LQL + +LLP ++ EVEDFVD  GK+S+ +EE        N G  S +LS+  W T     +S++   + E+++A+  A+ CIK+C PE +ITESKFL+ ESLQEL+KAL+  +  E +       YD E + F LE L+ I L+NRDR+  +WQ +R+HL ++ + A    FLVERAVVGLLRLAIRL+RRE+ISAQ+L++LRILL+M P VL   S Q++YGLHEL++TNA++IH   DW T+ T+L+
Sbjct:    1 MVDKN-IYIIQGEINIVVGAIKRNARWSTHTPLDEERDPLLHSFGHLKEVLNSITELSEIEPNVFLRPFLEVIRSEDTTGPITGLALTSVNKFLSYALIDPTHEGTAEGMENMADAVTHARFVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKSAEHTLVDMVQLLFTRLPQFKEEPKNYVGTNMKKLKMRAGGMSDSSKWKKQKRSPRPPRHMTKVTPGSELPTPNGTTLSSNLTGGMPFIDVPTPISSASSEAASAVVSPSTDSGLEFSSQTTSKE----------------------DLTDLEQPGSPGYSTATE---PGSSELGVPEQPDLQEGTHVEKSQSASVESI----------PEV----------LEECTSPADHSDSASVHD------MDYVNPRGVRFT-QSSQKEGTA-LVPYGLPCIRELFRFLISLTNPHDRHNSEVMIHMGLHLLTVALESAP--VAQCQTLLGLIKDEMCRHLFQLLSIERLNLYAASLRVCFLLFESMREHLKFQMEMYIKKLMEIITVENPKMPYEMKEMALEAIVQLWRIPSFVTELYINYDCDYYCSNLFEELTKLLSKNAFPVSGQLYTTHLLSLDALLTVIDSTEAHCQAKVLNSLTQQEKKETARPSCEIVDGTREASNTERTASDGKAVGMASDIPGLHLPGGGRLPPEHGKSGCSDLEEAVDSG-ADKKFARKPPRFSCLLPDPRELIEIKNKKKLLITGTEQFNQKPKKGIQFLQEKGLLTIPMDNTEVAQWLRENPRLDKKMIGEFVSDRKNIDLLESFVSTFSFQGLRLDEALRLYLEAFRLPGEAPVIQRLLEAFTERWMNCNGSPFANSDACFSLAYAVIMLNTDQHNHNVRKQNAPMTLEEFRKNLKGVNGGKDFEQDILEDMYHAIKNEEIVMPEEQTGLVRENYVWNVLLHRGATPEGIFLRVPTASYDLDLFTMTWGPTIAALSYVFDKSLEETIIQKAISGFRKCAMISAHYGLSDVFDNLIISLCKFTAL--SSESIENLPSVFGSNPKAHIAAKTVFHLAHRHGDILREGWKNIMEAMLQLFRAQLLPKAMIEVEDFVDPNGKISLQREE-----TPSNRGE-STVLSFVSWLTLSGPEQSSVRGPSTENQEAKRVALECIKQCDPEKMITESKFLQLESLQELMKALVSVTPDEET-------YDEEDAAFCLEMLLRIVLENRDRVGCVWQTVRDHLYHLCVQAQDFCFLVERAVVGLLRLAIRLLRREEISAQVLLSLRILLLMKPSVLSRVSHQVAYGLHELLKTNAANIHSGDDWATLFTLLE 1271          
The following BLAST results are available for this feature:
BLAST of TCONS_00013659-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GBF10.000e+046.98Golgi-specific brefeldin A-resistance guanine nucl... [more]
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