TCONS_00013643-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013643-protein
Unique NameTCONS_00013643-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length168

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013643-protein ID=TCONS_00013643-protein|Name=TCONS_00013643-protein|organism=Clytia hemisphaerica|type=polypeptide|length=168bp
MKNWTYFIGLCFITLSTAMYVPTATIKKIKNSKSSLQFNQPGTGADTPNI
FPQKGLHENGGIKVEILKPFIPDIAPLEANSYNSKCSIHKTNMTVSRQGC
GQLVFEYTYCLGHCSPKLNLQTNKPACQSCKQKATIEKTLPFVCNNGGQT
PPVYKVQMASSCECGSCT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007618XLOC_007618Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013643TCONS_00013643Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006207Cys_knot_C
IPR029034Cystine-knot_cytokine
IPR006208Glyco_hormone_CN
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006207Cystine knot, C-terminalSMARTSM00041CT_3coord: 88..168
e-value: 9.9E-4
score: 21.6
IPR006207Cystine knot, C-terminalPROSITEPS01225CTCK_2coord: 86..168
score: 9.563
IPR029034Cystine-knot cytokineGENE3D2.10.90.10coord: 80..168
e-value: 6.6E-9
score: 35.4
IPR006208Glycoprotein hormone subunit beta, cystine knotPFAMPF00007Cys_knotcoord: 84..168
e-value: 3.5E-6
score: 27.2

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013643-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top